Pairwise fitting emdb-5034 on emdb-6399 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-6399 by gmfit(PID:4106132).





RANK[1] Corr.Coeff:0.445

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-6399)

display:



color:


Structure of the intact ATM/Tel1 kinase [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.445
0.423
0.423
0.419
0.414
0.410
0.410
0.410
0.257
0.255







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6399.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.781728,-0.567608,0.258309 172.590592 center 0,0,0 model #1
move 237.909755,467.338002,279.635164 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6399)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4106132)]