Pairwise fitting emdb-5034 on emdb-3671 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-3671 by gmfit(PID:4060812).

RANK[1] Corr.Coeff:0.474 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-3671)
display:
color:
Open dimer of human ATM (Ataxia telangiectasia mutated) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.474 0.447 0.444 0.441 0.435 0.418 0.415 0.407 0.406 0.292

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3671.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.892566,-0.194481,-0.406821 93.734231 center 0,0,0 model #1
    move -64.730041,84.174017,232.158041 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3671)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4060812)]