Pairwise fitting emdb-1975 on pdb-5w9i by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-5w9i by gmfit(PID:557326).





RANK[1] Corr.Coeff:0.550

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-5w9i)

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color:


b'MERS S ECTODOMAIN TRIMER IN COMPLEX WITH VARIABLE DOMAIN OF           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.550
0.509
0.498
0.497
0.463
0.448
0.436
0.435
0.430
0.388







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5w9i"(PDB-format) or 
 "5w9i"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.817323,0.410545,0.404273 62.789784 center 0,0,0 model #1
move 65.572267,-181.124096,293.380664 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!