Pairwise fitting emdb-1836 on emdb-1431 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-1431 by gmfit(PID:4058138).

RANK[1] Corr.Coeff:0.582 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-1431)
display:
color:
The three-dimensional structure of genomic RNA in bacteriophage MS2: implications for assembly. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.582 0.581 0.572 0.572 0.572 0.569 0.566 0.566 0.565 0.564

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1431.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.248517,-0.179663,0.951820 176.376599 center 0,0,0 model #1
    move 259.267896,386.347434,-3.553307 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1431)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4058138)]