Pairwise fitting emdb-1774 on emdb-3663 by gmfit



Pairwise fitting of target emdb-1774 on reference emdb-3663 by gmfit(PID:4060709).

RANK[1] Corr.Coeff:0.791 [JSmol] [Molmil]
TARGET(emdb-1774)
display:
color:
Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1774)]
REFERENCE(emdb-3663)
display:
color:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.791 0.604 0.469 0.430 0.413 0.402 0.395 0.338 0.290 0.289

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3663.map.gz", and read it.
  2. Download the Target map "emd_1774.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.835679,-0.485251,-0.257240 10.776201 center 0,0,0 model #1
    move 19.871844,-3.319993,26.940531 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3663)] [Download the target GMM(emdb 1774)] [Download gmfit result file(4060709)]