Pairwise fitting emdb-1774 on emdb-3663 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-3663 by gmfit(PID:1889303).





RANK[1] Corr.Coeff:0.795

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

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Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-3663)

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RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.795
0.795
0.791
0.604
0.604
0.552
0.539
0.538
0.537
0.333







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3663.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.837492,-0.504432,-0.210131 9.619748 center 0,0,0 model #1
move 24.137011,-2.161908,24.994828 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3663)]

[Download the target GMM(emdb 1774)]

[Download gmfit result file(1889303)]