Pairwise fitting emdb-1770 on emdb-3579 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3579 by gmfit(PID:647519).





RANK[1] Corr.Coeff:0.918

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3579)

display:



color:


30S ribosomal subunit with partial density for ribosomal protein S1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.918
0.733
0.648
0.644
0.644
0.627
0.615
0.583
0.579
0.532







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3579.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.719078,0.689104,-0.089796 173.614708 center 0,0,0 model #1
move 220.876545,271.264260,253.092375 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!