Pairwise fitting emdb-1711 on emdb-8659 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-8659 by gmfit(PID:860125).





RANK[1] Corr.Coeff:0.679

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-8659)

display:



color:


VCP like ATPase from T. acidophilum (VAT)-Substrate bound conformation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.679
0.654
0.637
0.637
0.629
0.627
0.607
0.603
0.602
0.599







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8659.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.879310,0.203241,0.430705 171.804930 center 0,0,0 model #1
move 191.069728,179.565068,185.349820 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8659)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(860125)]