Pairwise fitting emdb-1711 on emdb-3815 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-3815 by gmfit(PID:4136014).





RANK[1] Corr.Coeff:0.710

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

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Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-3815)

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Structure of an RNA polymerase II-DSIF transcription elongation complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.710
0.692
0.643
0.642
0.640
0.635
0.634
0.627
0.624
0.616







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3815.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.837372,0.461909,-0.292316 69.965403 center 0,0,0 model #1
move 173.059738,177.639049,145.912438 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3815)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(4136014)]