Pairwise fitting emdb-1711 on emdb-3815 by gmfit



Pairwise fitting of target emdb-1711 on reference emdb-3815 by gmfit(PID:4099994).

RANK[1] Corr.Coeff:0.710 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(emdb-3815)
display:
color:
Structure of an RNA polymerase II-DSIF transcription elongation complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.710 0.692 0.643 0.642 0.640 0.635 0.634 0.627 0.624 0.616

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3815.map.gz", and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.837372,0.461909,-0.292316 69.965403 center 0,0,0 model #1
    move 173.059738,177.639049,145.912438 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3815)] [Download the target GMM(emdb 1711)] [Download gmfit result file(4099994)]