Pairwise fitting emdb-1711 on emdb-3198 by gmfit



Pairwise fitting of target emdb-1711 on reference emdb-3198 by gmfit(PID:4119179).

RANK[1] Corr.Coeff:0.548 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(emdb-3198)
display:
color:
Cryo-EM structure of the E. coli replicative DNA polymerase complex bound to DNA (DNA polymerase III alpha, beta, epsilon, and tau subunits) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.548 0.517 0.511 0.497 0.485 0.484 0.480 0.470 0.465 0.448

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3198.map.gz", and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.593734,0.444217,-0.670933 91.393084 center 0,0,0 model #1
    move 116.461871,108.065454,120.092825 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3198)] [Download the target GMM(emdb 1711)] [Download gmfit result file(4119179)]