Pairwise fitting emdb-1565 on emdb-1541 by gmfit










Pairwise fitting of target emdb-1565 on reference emdb-1541 by gmfit(PID:4104019).





RANK[1] Corr.Coeff:0.948

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1565)

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Recognition of Phe-tRNAPhe, Trp-tRNATrp and  : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1565)]







REFERENCE(emdb-1541)

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color:


Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.948
0.912
0.772
0.752
0.744
0.735
0.721
0.717
0.703
0.691







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1541.map.gz", and read it.

  2.  Download the Target map "emd_1565.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.720684,0.693253,0.003803 178.230241 center 0,0,0 model #1
move 187.079413,184.272915,188.898281 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1541)]

[Download the target GMM(emdb 1565)]

[Download gmfit result file(4104019)]