Pairwise fitting emdb-1565 on emdb-1541 by gmfit



Pairwise fitting of target emdb-1565 on reference emdb-1541 by gmfit(PID:4115643).

RANK[1] Corr.Coeff:0.948 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(emdb-1541)
display:
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Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.948 0.912 0.772 0.752 0.744 0.735 0.721 0.717 0.703 0.691

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1541.map.gz", and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.720684,0.693253,0.003803 178.230241 center 0,0,0 model #1
    move 187.079413,184.272915,188.898281 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1541)] [Download the target GMM(emdb 1565)] [Download gmfit result file(4115643)]