Pairwise fitting emdb-1559 on emdb-3445 by gmfit



Pairwise fitting of target emdb-1559 on reference emdb-3445 by gmfit(PID:4130974).

RANK[1] Corr.Coeff:0.646 [JSmol] [Molmil]
TARGET(emdb-1559)
display:
color:
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(emdb-3445)
display:
color:
cryo-electron microscopy reconstruction of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.646 0.635 0.590 0.586 0.578 0.567 0.555 0.551 0.546 0.546

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3445.map.gz", and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.498107,-0.405053,0.766695 149.642354 center 0,0,0 model #1
    move 521.380853,977.332837,-191.275740 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3445)] [Download the target GMM(emdb 1559)] [Download gmfit result file(4130974)]