Pairwise fitting emdb-1559 on emdb-3445 by gmfit










Pairwise fitting of target emdb-1559 on reference emdb-3445 by gmfit(PID:4100882).





RANK[1] Corr.Coeff:0.646

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(emdb-3445)

display:



color:


cryo-electron microscopy reconstruction of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.646
0.635
0.590
0.586
0.578
0.567
0.555
0.551
0.546
0.546







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3445.map.gz", and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.498107,-0.405053,0.766695 149.642354 center 0,0,0 model #1
move 521.380853,977.332837,-191.275740 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3445)]

[Download the target GMM(emdb 1559)]

[Download gmfit result file(4100882)]