Pairwise fitting emdb-1430 on emdb-3901 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-3901 by gmfit(PID:507488).





RANK[1] Corr.Coeff:0.767

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-3901)

display:



color:


Polyproline-stalled ribosome with distorted A-site and P-site tRNA [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.767
0.748
0.728
0.718
0.708
0.693
0.690
0.682
0.667
0.657







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3901.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.261643,0.422384,0.867834 126.914960 center 0,0,0 model #1
move 191.704409,179.902917,224.387356 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!