Pairwise fitting emdb-1390 on emdb-1386 by gmfit



Pairwise fitting of target emdb-1390 on reference emdb-1386 by gmfit(PID:4100608).

RANK[1] Corr.Coeff:0.920 [JSmol] [Molmil]
TARGET(emdb-1390)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1390)]
REFERENCE(emdb-1386)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.920 0.603 0.601 0.514 0.427 0.256 0.249 0.234 0.228 0.160

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1386.map.gz", and read it.
  2. Download the Target map "emd_1390.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.725805,0.287687,-0.624854 0.603651 center 0,0,0 model #1
    move 0.057400,-0.092423,0.132451 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1386)] [Download the target GMM(emdb 1390)] [Download gmfit result file(4100608)]