Pairwise fitting emdb-1252 on emdb-8816 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-8816 by gmfit(PID:628977).





RANK[1] Corr.Coeff:0.660

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-8816)

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TFIIH reconstruction from particles sorted for density near the XPD ARCH domain using signal-subtracted classification. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.660
0.565
0.547
0.524
0.498
0.469
0.452
0.452
0.450
0.449







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8816.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.425340,0.035263,-0.904346 131.901689 center 0,0,0 model #1
move 4.682985,362.185899,15.295715 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!