Pairwise fitting emdb-1183 on emdb-8754 by gmfit



Pairwise fitting of target emdb-1183 on reference emdb-8754 by gmfit(PID:4149803).

RANK[1] Corr.Coeff:0.926 [JSmol] [Molmil]
TARGET(emdb-1183)
display:
color:
Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(emdb-8754)
display:
color:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, full particle) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.926 0.913 0.908 0.908 0.908 0.908 0.908 0.907 0.905 0.904

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8754.map.gz", and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.504053,-0.456608,-0.733102 128.736559 center 0,0,0 model #1
    move 336.415025,335.811659,335.738996 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8754)] [Download the target GMM(emdb 1183)] [Download gmfit result file(4149803)]