Pairwise fitting emdb-1183 on emdb-1049 by gmfit



Pairwise fitting of target emdb-1183 on reference emdb-1049 by gmfit(PID:4090931).

RANK[1] Corr.Coeff:0.676 [JSmol] [Molmil]
TARGET(emdb-1183)
display:
color:
Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(emdb-1049)
display:
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A cellular receptor of human rhinovirus type 2, the very-low-density lipoprotein receptor, binds to two neighboring proteins of the viral capsid. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.676 0.673 0.671 0.669 0.668 0.668 0.668 0.667 0.666 0.664

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1049.map.gz", and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.460552,0.677421,0.573579 48.451522 center 0,0,0 model #1
    move -1.909659,0.476764,0.631561 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1049)] [Download the target GMM(emdb 1183)] [Download gmfit result file(4090931)]