Pairwise fitting emdb-1183 on emdb-1049 by gmfit










Pairwise fitting of target emdb-1183 on reference emdb-1049 by gmfit(PID:4115360).





RANK[1] Corr.Coeff:0.676

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1183)

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Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1183)]







REFERENCE(emdb-1049)

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A cellular receptor of human rhinovirus type 2, the very-low-density lipoprotein receptor, binds to two neighboring proteins of the viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.676
0.673
0.671
0.669
0.668
0.668
0.668
0.667
0.666
0.664







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1049.map.gz", and read it.

  2.  Download the Target map "emd_1183.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.460552,0.677421,0.573579 48.451522 center 0,0,0 model #1
move -1.909659,0.476764,0.631561 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1049)]

[Download the target GMM(emdb 1183)]

[Download gmfit result file(4115360)]