Pairwise fitting emdb-1022 on emdb-8887 by gmfit










Pairwise fitting of target emdb-1022 on reference emdb-8887 by gmfit(PID:1243328).





RANK[1] Corr.Coeff:0.690

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(emdb-8887)

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Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.690
0.623
0.612
0.612
0.605
0.601
0.600
0.593
0.474
0.463







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8887.map.gz", and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.920951,0.002768,0.389669 99.510102 center 0,0,0 model #1
move 70.925511,173.470034,18.285762 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!