Pairwise fitting PDB-2rec on EMD-1022 by gmfit










Pairwise fitting of target PDB-2rec on reference EMD-1022 by gmfit(PID:2320426).





RANK[1] Corr.Coeff:0.764

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(PDB-2rec)

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b'RECA HEXAMER MODEL, ELECTRON MICROSCOPY                               ' [Ngauss:20]

[Download superimposed target atoms (PDB)(PDB-2rec)]







REFERENCE(EMD-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.764
0.764
0.760
0.759
0.758
0.757
0.757
0.756
0.754
0.752







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1022.map.gz", and read it.

  2.  Download the Target molecule "2rec"(PDB-format) or
  "2rec"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.879668,-0.475535,0.007111 178.001927 center 0,0,0 model #1
move 94.570051,90.965786,70.899095 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1022)]

[Download the target GMM(pdb 2rec)]

[Download gmfit result file(2320426)]