Pairwise fitting emdb-5168 on pdb-2w4h by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-2w4h by gmfit(PID:3878838).





RANK[7] Corr.Coeff:0.428

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-2w4h)

display:



color:


b'ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE QUICK     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.475
0.461
0.434
0.432
0.431
0.431
0.428
0.417
0.402
0.225







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2w4h"(PDB-format) or 
 "2w4h"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.003390,-0.951572,0.307407 129.105515 center 0,0,0 model #1
move -85.666550,-6.637165,0.978025 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!