Pairwise fitting pdb-3izd on pdb-2iy3 by gmfit










Pairwise fitting of target pdb-3izd on reference pdb-2iy3 by gmfit(PID:3096254).





RANK[9] Corr.Coeff:0.123

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

display:



color:



b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(pdb-2iy3)

display:



color:


b'STRUCTURE OF THE E. COLI SIGNAL REGOGNITION PARTICLE                  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.442
0.317
0.309
0.272
0.228
0.200
0.173
0.124
0.123
0.106







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2iy3"(PDB-format) or 
 "2iy3"(mmCIF-format), and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.348845,0.814607,-0.463382 179.637629 center 0,0,0 model #1
move 394.104098,185.459133,287.195608 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!