Pairwise fitting emdb-1836 on emdb-1880 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-1880 by gmfit(PID:2770694).





RANK[8] Corr.Coeff:0.842

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-1880)

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Mutually-induced conformational switching of RNA and coat protein underpins efficient assembly of a viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.861
0.857
0.849
0.848
0.848
0.847
0.844
0.842
0.841
0.838







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1880.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.791528,-0.571363,0.216859 47.830666 center 0,0,0 model #1
move 152.702807,159.101933,-105.510770 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!