Pairwise fitting emdb-1311 on emdb-6653 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-6653 by gmfit(PID:2725549).





RANK[10] Corr.Coeff:0.640

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-6653)

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Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.752
0.731
0.714
0.705
0.687
0.670
0.664
0.654
0.642
0.640







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6653.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.867413,0.080348,-0.491058 149.178143 center 0,0,0 model #1
move 236.485875,188.092208,224.418372 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!