Pairwise fitting pdb-3izd on emdb-2900 by gmfit










Pairwise fitting of target pdb-3izd on reference emdb-2900 by gmfit(PID:1345201).





RANK[2] Corr.Coeff:0.285

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

display:



color:



b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(emdb-2900)

display:



color:


Structures of the CRISPR-Cmr complex reveal mode of RNA target positioning [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.337
0.285
0.282
0.275
0.270
0.269
0.216
0.198
0.120
0.109







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2900.map.gz", and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.076711,-0.906496,-0.415186 100.533973 center 0,0,0 model #1
move 195.786093,151.345585,40.422197 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!