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Yorodumi- PDB-2hoa: STRUCTURE DETERMINATION OF THE ANTP(C39->S) HOMEODOMAIN FROM NUCL... -
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-Basic information
Entry | Database: PDB / ID: 2hoa | ||||||
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Title | STRUCTURE DETERMINATION OF THE ANTP(C39->S) HOMEODOMAIN FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION USING A NOVEL STRATEGY FOR THE STRUCTURE CALCULATION WITH THE PROGRAMS DIANA, CALIBA, HABAS AND GLOMSA | ||||||
Components | ANTENNAPEDIA PROTEIN | ||||||
Keywords | DNA BINDING PROTEIN / DNA-BINDING PROTEIN | ||||||
Function / homology | Function and homology information specification of segmental identity, antennal segment / specification of segmental identity, thorax / neuroblast development / muscle cell fate specification / lymph gland development / ventral cord development / midgut development / multicellular organism development / anterior/posterior axis specification / anterior/posterior pattern specification ...specification of segmental identity, antennal segment / specification of segmental identity, thorax / neuroblast development / muscle cell fate specification / lymph gland development / ventral cord development / midgut development / multicellular organism development / anterior/posterior axis specification / anterior/posterior pattern specification / regulation of neurogenesis / heart development / sequence-specific DNA binding / DNA-binding transcription factor activity, RNA polymerase II-specific / RNA polymerase II cis-regulatory region sequence-specific DNA binding / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / DNA binding / nucleus / cytoplasm Similarity search - Function | ||||||
Biological species | Drosophila melanogaster (fruit fly) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Guntert, P. / Qian, Y.-Q. / Otting, G. / Muller, M. / Gehring, W.J. / Wuthrich, K. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1991 Title: Structure determination of the Antp (C39----S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA. Authors: Guntert, P. / Qian, Y.Q. / Otting, G. / Muller, M. / Gehring, W. / Wuthrich, K. #1: Journal: Cell(Cambridge,Mass.) / Year: 1989 Title: The Structure of the Antennapedia Homeodomain Determined by NMR Spectroscopy in Solution: Comparison with Prokaryotic Repressors Authors: Qian, Y.-Q. / Billeter, M. / Otting, G. / Mueller, M. / Gehring, W.J. / Wuthrich, K. #2: Journal: J.Mol.Biol. / Year: 1990 Title: Determination of the Three-Dimensional Structure of the Antennapedia Homeodomain from Drosophila in Solution by 1H Nuclear Magnetic Resonance Spectroscopy Authors: Billeter, M. / Qian, Y.-Q. / Otting, G. / Mueller, M. / Gehring, W.J. / Wuthrich, K. #3: Journal: Embo J. / Year: 1988 Title: Secondary Structure Determination for the Antennapedia Homeodomain by Nuclear Magnetic Resonance and Evidence for a Helix-Turn-Helix Motif Authors: Otting, G. / Qian, Y.-Q. / Mueller, M. / Affolter, M. / Gehring, W.J. / Wuthrich, K. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2hoa.cif.gz | 539.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2hoa.ent.gz | 460.7 KB | Display | PDB format |
PDBx/mmJSON format | 2hoa.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2hoa_validation.pdf.gz | 358.2 KB | Display | wwPDB validaton report |
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Full document | 2hoa_full_validation.pdf.gz | 480.9 KB | Display | |
Data in XML | 2hoa_validation.xml.gz | 20.3 KB | Display | |
Data in CIF | 2hoa_validation.cif.gz | 35.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ho/2hoa ftp://data.pdbj.org/pub/pdb/validation_reports/ho/2hoa | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8661.094 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Drosophila melanogaster (fruit fly) / Production host: Escherichia coli (E. coli) / References: UniProt: P02833, UniProt: Q7KSY7*PLUS |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
NMR software |
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NMR ensemble | Conformers submitted total number: 20 |