Entry Database : PDB / ID : 2cgz Structure visualization Downloads & linksTitle Structure of Helix Pomatia agglutinin with Tn antigen ComponentsAGGLUTININ Details Keywords SUGAR BINDING PROTEIN / LECTIN / SNAILFunction / homology Function and homology informationFunction Domain/homology Component
N-acetylgalactosamine binding / protein complex involved in cell adhesion / oligosaccharide binding / polysaccharide binding / phagocytic vesicle / cell-cell adhesion / cell surface / metal ion binding Similarity search - Function : / Immunoglobulin-like - #2080 / H-type lectin domain / H-type lectin domain superfamily / H-type lectin domain / Immunoglobulin-like / Sandwich / Mainly Beta Similarity search - Domain/homologyBiological species HELIX POMATIA (Roman snail)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2.8 Å DetailsAuthors Sanchez, J.-F. / Lescar, J. / Audfray, A. / Gautier, C. / Chazalet, V. / Gagnon, J. / Breton, C. / Imberty, A. / Mitchell, E.P. CitationJournal : Glycobiology / Year : 2007Title : Structural Basis for Recognition of Breast and Colon Cancer Epitopes Tn Antigen and Forssman Disaccharide by Helix Pomatia Lectin.Authors : Lescar, J. / Sanchez, J.-F. / Audfray, A. / Coll, J. / Breton, C. / Mitchell, E.P. / Imberty, A. History Deposition Mar 10, 2006 Deposition site : PDBE / Processing site : PDBERevision 1.0 May 1, 2007 Provider : repository / Type : Initial releaseRevision 1.1 Sep 28, 2011 Group : Database references / Derived calculations ... Database references / Derived calculations / Non-polymer description / Other / Structure summary / Version format compliance Revision 1.2 May 8, 2019 Group : Data collection / Derived calculations ... Data collection / Derived calculations / Experimental preparation / Other Category : database_PDB_rev / database_PDB_rev_record ... database_PDB_rev / database_PDB_rev_record / exptl_crystal_grow / pdbx_database_proc / pdbx_database_status / struct_conn Item : _exptl_crystal_grow.method / _pdbx_database_status.recvd_author_approval / _struct_conn.pdbx_leaving_atom_flagRevision 2.0 Jul 1, 2020 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Non-polymer description / Other / Structure summary Category : atom_site / chem_comp ... atom_site / chem_comp / entity / pdbx_database_status / pdbx_entity_nonpoly / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / struct_asym / struct_conn Item : _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ... _atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.type_symbol / _chem_comp.formula / _chem_comp.formula_weight / _chem_comp.id / _chem_comp.mon_nstd_flag / _chem_comp.name / _chem_comp.type / _pdbx_database_status.status_code_sf / _pdbx_struct_assembly_gen.asym_id_list / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_value_order / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn.ptnr2_symmetry Revision 3.0 Jul 29, 2020 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Structure summary Category : atom_site / chem_comp ... atom_site / chem_comp / entity / pdbx_chem_comp_identifier / pdbx_entity_nonpoly / struct_conn / struct_site / struct_site_gen Item : _atom_site.auth_atom_id / _atom_site.label_atom_id ... _atom_site.auth_atom_id / _atom_site.label_atom_id / _chem_comp.name / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_conn.pdbx_role Description : Carbohydrate remediation / Provider : repository / Type : RemediationRevision 3.1 Dec 13, 2023 Group : Data collection / Database references ... Data collection / Database references / Refinement description / Structure summary Category : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession
Show all Show less Remark 650 HELIX DETERMINATION METHOD: AUTHOR PROVIDED. Remark 700 SHEET DETERMINATION METHOD: AUTHOR PROVIDED.