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Yorodumi Species
- Taxonomy data in EMDB/PDB/SASBDB -

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Search query

Name, Taxonomy-ID, or Keywords:

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Result of keyword search

Showing 1 - 20 of 7,100 items

NameEMDBPDBSASBDB
Insect cells (unknown)000
In vitro (unknown)000
Stably transferred dog epithelial cell (unknown)000
Ns/0 murine myeloma cells (unknown)000
Periplasmic secretion (u.s pat 4963,495) (unknown)000
Shuttle plasmid from escherichia coli mc1061 to staphylococcus aureus rn4220 (unknown)000
Hi-5 insect cells (unknown)000
Tac promoter (unknown)000
Bl21 (unknown)000
Sf9 cells (unknown)000
Pharmacia pgex-3x expression vector (unknown)000
Insect cell (unknown)000
Cho cells as gpi-linked protein (unknown)000
Pembl (dente et al 1983 nuc acids res 11,1645) (unknown)000
Sf21 insect cells (unknown)000
Cell-free protein synthesis (unknown)000
Schneider S2 insect cells (unknown)000
Gst-fusion (unknown)000
Bl21(de3) (unknown)000
Computationally Designed Sequence (unknown)010

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About Yorodumi Species

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News

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Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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Jun 16, 2017. Omokage search with filter

Omokage search with filter

  • Result of Omokage search can be filtered by keywords and the database types

Related info.: Omokage search

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Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi

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Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi

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Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

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Yorodumi Speices

Taxonomy data in EMDB/PDB/SASBDB

  • Taxonomy database of sample sources of data in EMDB/PDB/SASBDB

Related info.: EMDB / PDB / SASBDB / Comparison of 3 databanks

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