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- SASDFL9: Poly-uridine rU30 in 200 mM NaCl (Poly-uridine, rU30) -

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Basic information

Entry
Database: SASBDB / ID: SASDFL9
SamplePoly-uridine rU30 in 200 mM NaCl
  • Poly-uridine (RNA), rU30
Contact author
  • Alex Plumridge (Cornell University, Ithaca, NY, United States)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3458
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3459
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3460
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3461
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3462
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3463
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3464
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3465
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3466
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3467
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3468
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3469
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3470
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3471
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3472
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3473
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3474
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3475
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3476
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)
Model #3477
Type: atomic / Chi-square value: 1.062961 / P-value: 0.987621
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Poly-uridine rU30 in 200 mM NaCl / Specimen concentration: 0.40-1.20
BufferName: 1 mM Na-MOPS, 200 mM NaCl, 20 µM EDTA / pH: 7
Entity #1770Name: rU30 / Type: RNA / Description: Poly-uridine / Formula weight: 9.203 / Num. of mol.: 1
Sequence:
UUUUUUUUUU UUUUUUUUUU UUUUUUUUUU

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.04 mm
DetectorName: Finger Lakes CCD / Type: CCD
Scan
Title: Poly-uridine rU30 in 200 mM NaCl / Measurement date: Oct 25, 2015 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 10 sec. / Number of frames: 30 / Unit: 1/A /
MinMax
Q0.01 0.27
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 253 /
MinMax
Q0.018 0.27
P(R) point1 253
R0 110
Result
Type of curve: extrapolated /
ExperimentalPorod
MW16 kDa-
Volume-15 nm3

P(R)GuinierGuinier error
Forward scattering, I029.02 28.48 0.29
Radius of gyration, Rg2.73 nm2.51 nm0.03

MinMax
D-11
Guinier point5 44

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