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- SASDFC9: Poly-adenosine rA30 in 200 mM NaCl (Poly-adenosine, rA30) -

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Basic information

Entry
Database: SASBDB / ID: SASDFC9
SamplePoly-adenosine rA30 in 200 mM NaCl
  • Poly-adenosine (RNA), rA30
Contact author
  • Alex Plumridge (Cornell University, Ithaca, NY, United States)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3357
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3358
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3359
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3360
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3361
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3362
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3363
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3364
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3365
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3366
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3367
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3368
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3369
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3370
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3371
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3372
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3373
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3374
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3375
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3376
Type: atomic / Chi-square value: 1.151329 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Poly-adenosine rA30 in 200 mM NaCl / Specimen concentration: 0.40-1.20
BufferName: 1 mM Na-MOPS, 200 mM NaCl, 20 µM EDTA / pH: 7
Entity #1769Name: rA30 / Type: RNA / Description: Poly-adenosine / Formula weight: 9.894 / Num. of mol.: 1
Sequence:
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.04 mm
DetectorName: Finger Lakes CCD / Type: CCD
Scan
Title: Poly-adenosine rA30 in 200 mM NaCl / Measurement date: Oct 25, 2015 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 10 sec. / Number of frames: 30 / Unit: 1/A /
MinMax
Q0.01 0.27
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 254 /
MinMax
Q0.017 0.27
P(R) point1 254
R0 105
Result
Type of curve: extrapolated /
ExperimentalPorod
MW15 kDa-
Volume-14 nm3

P(R)GuinierGuinier error
Forward scattering, I035.88 35.66 0.33
Radius of gyration, Rg2.66 nm2.51 nm0.03

MinMax
D-10.5
Guinier point4 43

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