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- SASDFA9: Poly-adenosine rA30 in 20 mM NaCl (Poly-adenosine, rA30) -

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Basic information

Entry
Database: SASBDB / ID: SASDFA9
SamplePoly-adenosine rA30 in 20 mM NaCl
  • Poly-adenosine (RNA), rA30
Contact author
  • Alex Plumridge (Cornell University, Ithaca, NY, United States)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #3317
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3318
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3319
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3320
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3321
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3322
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3323
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3324
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3325
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3326
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3327
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3328
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3329
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3330
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3331
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3332
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3333
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3334
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3335
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)
Model #3336
Type: atomic / Chi-square value: 1.014049 / P-value: 0.394932
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Poly-adenosine rA30 in 20 mM NaCl / Specimen concentration: 0.40-1.20
BufferName: 1 mM Na-MOPS, 20 mM NaCl, 20 µM EDTA / pH: 7
Entity #1769Name: rA30 / Type: RNA / Description: Poly-adenosine / Formula weight: 9.894 / Num. of mol.: 1
Sequence:
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.04 mm
DetectorName: Finger Lakes CCD / Type: CCD
Scan
Title: Poly-adenosine rA30 in 20 mM NaCl / Measurement date: Oct 24, 2015 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 10 sec. / Number of frames: 30 / Unit: 1/A /
MinMax
Q0.01 0.27
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 223 /
MinMax
Q0.011 0.233
P(R) point1 223
R0 110.1
Result
Type of curve: extrapolated /
ExperimentalPorod
MW13 kDa-
Volume-17 nm3

P(R)GuinierGuinier error
Forward scattering, I031.8 31.7 0.39
Radius of gyration, Rg2.8 nm2.72 nm0.06

MinMax
D-11.01
Guinier point5 38

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