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Yorodumi- SASDB29: Single stranded poly-deoxyadenosine DNA (30mer, dA30) in 200 mM NaCl -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDB29 |
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Sample | Single stranded poly-deoxyadenosine DNA (30mer, dA30) in 200 mM NaCl
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Citation | Date: 2017 Feb 25 Title: The impact of base stacking on the conformations and electrostatics of single-stranded DNA Authors: Plumridge A / Meisburger S / Andresen K |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Models
Model #1032 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: State 1 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
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Model #1033 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: State 2 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1034 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: State 3 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1035 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 4 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1036 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 5 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1037 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 6 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1038 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 7 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1039 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 8 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1040 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 9 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1041 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 10 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1042 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 11 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1043 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: State 12 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1044 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 13 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1045 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: State 14 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1046 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 15 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1047 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 16 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1048 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 17 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1049 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 18 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1050 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 19 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
Model #1051 | Type: dummy / Software: Custom / Radius of dummy atoms: 1.90 A / Comment: state 20 / Chi-square value: 1.014049 Search similar-shape structures of this assembly by Omokage search (details) |
-Sample
Sample | Name: Single stranded poly-deoxyadenosine DNA (30mer, dA30) in 200 mM NaCl Specimen concentration: 0.50-1.80 |
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Buffer | Name: 1mM Na MOPS, 200mM NaCl / pH: 7 |
Entity #401 | Name: dA30 / Type: DNA / Description: Poly-deoxyadenosine (30mer) / Formula weight: 9.3 / Num. of mol.: 1 Sequence: AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA |
-Experimental information
Beam | Instrument name: Cornell High Energy Synchrotron Source (CHESS) G1 City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.1 Å / Dist. spec. to detc.: 1.8 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Finger Lakes CCD / Type: CCD | ||||||||||||||||||||||||||||||
Scan | Title: Single stranded poly-deoxyadenosine DNA (30mer, dA / Measurement date: Apr 1, 2015 / Storage temperature: 4 °C / Cell temperature: 22 °C / Exposure time: 10 sec. / Number of frames: 20 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 267 /
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Result | Type of curve: extrapolated /
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