[English] 日本語
Yorodumi
- PDB-9w4b: Crystal structure of beta-glucosidase CaBGL -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: PDB / ID: 9w4b
TitleCrystal structure of beta-glucosidase CaBGL
Componentsbeta-glucosidase
KeywordsHYDROLASE / CaBGL / cellulose saccharification / Caldicellulosiruptor sp. F32
Function / homology
Function and homology information


beta-glucosidase / beta-glucosidase activity / cellulose catabolic process / cytosol
Similarity search - Function
Glycoside hydrolase, family 1, beta-glucosidase / Glycoside hydrolase family 1, active site / Glycosyl hydrolases family 1 active site. / Glycosyl hydrolases family 1, N-terminal conserved site / Glycosyl hydrolases family 1 N-terminal signature. / Glycosyl hydrolase family 1 / Glycoside hydrolase family 1 / Glycoside hydrolase superfamily
Similarity search - Domain/homology
Biological speciesCaldicellulosiruptor sp. (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.34 Å
AuthorsYou, C. / Feng, Y.G.
Funding support China, 2items
OrganizationGrant numberCountry
National Natural Science Foundation of China (NSFC)32200030 China
National Natural Science Foundation of China (NSFC)32170051 China
CitationJournal: Bioresour Technol / Year: 2025
Title: Engineering of beta-glucosidase CaBGL with improved performance in cellulose hydrolysis.
Authors: You, C. / Zheng, X. / Qi, K. / Dong, S. / Liu, Y.J. / Chen, C. / Cui, Q. / Feng, Y.
History
DepositionJul 31, 2025Deposition site: PDBJ / Processing site: PDBC
Revision 1.0Oct 15, 2025Provider: repository / Type: Initial release

-
Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

-
Assembly

Deposited unit
A: beta-glucosidase
B: beta-glucosidase
C: beta-glucosidase
D: beta-glucosidase
E: beta-glucosidase
F: beta-glucosidase
G: beta-glucosidase
H: beta-glucosidase
I: beta-glucosidase
J: beta-glucosidase
K: beta-glucosidase
L: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)646,17348
Polymers642,76312
Non-polymers3,41136
Water13,529751
1
A: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
B: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
C: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
4
D: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
5
E: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
6
F: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
7
G: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
8
H: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
9
I: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
10
J: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
11
K: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
12
L: beta-glucosidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)53,8484
Polymers53,5641
Non-polymers2843
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)138.840, 221.660, 236.220
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number19
Space group name H-MP212121
Space group name HallP2ac2ab

-
Components

#1: Protein
beta-glucosidase / beta-glucosidase CaBGL


Mass: 53563.570 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Details: The sequence of organism Caldicellulosiruptor sp. is not available during the biocuration, replaced by I7DLX2 temporarily.
Source: (gene. exp.) Caldicellulosiruptor sp. (bacteria) / Production host: Escherichia coli (E. coli) / References: UniProt: I7DLX2, beta-glucosidase
#2: Chemical
ChemComp-GOL / GLYCEROL / GLYCERIN / PROPANE-1,2,3-TRIOL


Mass: 92.094 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C3H8O3
#3: Chemical...
ChemComp-SO4 / SULFATE ION


Mass: 96.063 Da / Num. of mol.: 24 / Source method: obtained synthetically / Formula: SO4
#4: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 751 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestN
Has protein modificationN

-
Experimental details

-
Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

CrystalDensity Matthews: 2.83 Å3/Da / Density % sol: 56.5 %
Crystal growTemperature: 289 K / Method: vapor diffusion / Details: 0.1M Bis-Tris, pH 6.5, 2.0 M Ammonium sulfate

-
Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: SSRF / Beamline: BL17U / Wavelength: 0.97919 Å
DetectorType: ADSC QUANTUM 315r / Detector: CCD / Date: May 24, 2019
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.97919 Å / Relative weight: 1
ReflectionResolution: 2.34→35.94 Å / Num. obs: 304606 / % possible obs: 99.8 % / Redundancy: 13.5 % / CC1/2: 0.998 / Rmerge(I) obs: 0.157 / Rpim(I) all: 0.044 / Rrim(I) all: 0.163 / Χ2: 1 / Net I/σ(I): 12.8 / Num. measured all: 4109188
Reflection shellResolution: 2.34→2.4 Å / % possible obs: 99.6 % / Redundancy: 14 % / Rmerge(I) obs: 2.101 / Num. measured all: 313827 / Num. unique obs: 22353 / CC1/2: 0.541 / Rpim(I) all: 0.576 / Rrim(I) all: 2.179 / Χ2: 0.88 / Net I/σ(I) obs: 1.9

-
Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
PHENIX1.20.1_4487refinement
Aimlessdata scaling
xia2data reduction
PHASERphasing
PDB_EXTRACTdata extraction
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.34→28.74 Å / SU ML: 0.3055 / Cross valid method: FREE R-VALUE / σ(F): 1.34 / Phase error: 25.5052
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflectionSelection details
Rfree0.2334 14842 4.88 %RANDOM
Rwork0.1883 289515 --
obs0.1904 304357 99.75 %-
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 60.08 Å2
Refinement stepCycle: LAST / Resolution: 2.34→28.74 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms45424 0 192 751 46367
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.007846924
X-RAY DIFFRACTIONf_angle_d0.891663608
X-RAY DIFFRACTIONf_chiral_restr0.05396452
X-RAY DIFFRACTIONf_plane_restr0.0078132
X-RAY DIFFRACTIONf_dihedral_angle_d6.07226032
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.34-2.370.34685030.30889559X-RAY DIFFRACTION99.48
2.37-2.390.32615020.29459524X-RAY DIFFRACTION99.5
2.39-2.420.32945020.2819516X-RAY DIFFRACTION99.53
2.42-2.450.31345360.27779526X-RAY DIFFRACTION99.55
2.45-2.490.34124880.28889556X-RAY DIFFRACTION99.47
2.49-2.520.30194810.27359551X-RAY DIFFRACTION99.47
2.52-2.560.29974940.25679558X-RAY DIFFRACTION99.7
2.56-2.590.29725090.2539561X-RAY DIFFRACTION99.68
2.59-2.640.30664910.2579594X-RAY DIFFRACTION99.61
2.64-2.680.31465290.25359526X-RAY DIFFRACTION99.63
2.68-2.720.30194890.25129623X-RAY DIFFRACTION99.77
2.72-2.770.32544860.25579582X-RAY DIFFRACTION99.61
2.77-2.830.28385220.23449565X-RAY DIFFRACTION99.83
2.83-2.890.29045230.23649587X-RAY DIFFRACTION99.67
2.89-2.950.29045070.23879578X-RAY DIFFRACTION99.84
2.95-3.020.30344880.24339652X-RAY DIFFRACTION99.78
3.02-3.090.27824740.22219626X-RAY DIFFRACTION99.81
3.09-3.180.29695150.22479589X-RAY DIFFRACTION99.83
3.18-3.270.28114590.22249686X-RAY DIFFRACTION99.89
3.27-3.370.25294740.21179693X-RAY DIFFRACTION99.86
3.37-3.490.23154700.19789676X-RAY DIFFRACTION99.92
3.49-3.630.23884640.18259722X-RAY DIFFRACTION99.91
3.63-3.80.22974830.17859679X-RAY DIFFRACTION99.97
3.8-40.2244890.17039709X-RAY DIFFRACTION99.94
4-4.250.18734830.15339704X-RAY DIFFRACTION99.79
4.25-4.580.19215040.14699735X-RAY DIFFRACTION99.96
4.58-5.030.16914940.13669785X-RAY DIFFRACTION99.96
5.03-5.760.20564810.15749827X-RAY DIFFRACTION99.98
5.76-7.230.20785070.16389884X-RAY DIFFRACTION99.97
7.23-28.740.1674950.142210142X-RAY DIFFRACTION99.41
Refinement TLS params.Method: refined / Origin x: 22.216 Å / Origin y: -38.272 Å / Origin z: -26.378 Å
111213212223313233
T0.358762312476 Å20.0234453845989 Å2-0.0455577332532 Å2-0.347746739433 Å2-0.0162611371407 Å2--0.352775783662 Å2
L0.142258739489 °20.0725394373809 °2-0.00978137857758 °2-0.0303648742929 °2-0.00343912917601 °2--0.00380938187395 °2
S-0.00421258122948 Å °-0.0308493479139 Å °0.029604553675 Å °-0.00775441387467 Å °0.00449191805913 Å °0.010064770851 Å °0.0211228097923 Å °0.000360281890091 Å °5.752E-7 Å °
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )A1 - 453
2X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )A501 - 503
3X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )A601 - 720
4X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )B1 - 453
5X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )B501 - 503
6X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )B601 - 628
7X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )B629
8X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )C1 - 453
9X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )C501 - 503
10X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )C601 - 735
11X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )C736
12X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )D1 - 453
13X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )D501 - 503
14X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )D601 - 691
15X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )E1 - 453
16X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )E501 - 503
17X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )E601 - 668
18X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )F2 - 453
19X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )F501 - 503
20X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )F601 - 666
21X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )G1 - 453
22X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )G501 - 503
23X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )G601 - 644
24X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )H2 - 453
25X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )H501 - 503
26X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )H601 - 661
27X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )I2 - 453
28X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )I501 - 503
29X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )I601 - 650
30X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )J1 - 453
31X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )J501 - 503
32X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )J601 - 635
33X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )K2 - 453
34X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )K501 - 503
35X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )K601 - 626
36X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )L1 - 453
37X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )L501 - 503
38X-RAY DIFFRACTION1( CHAIN A AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:720 ) ) OR ( CHAIN B AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:628 OR RESID 629:629 ) ) OR ( CHAIN C AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:735 OR RESID 736:736 ) ) OR ( CHAIN D AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:691 ) ) OR ( CHAIN E AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:668 ) ) OR ( CHAIN F AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:666 ) ) OR ( CHAIN G AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:644 ) ) OR ( CHAIN H AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:661 ) ) OR ( CHAIN I AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:650 ) ) OR ( CHAIN J AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:635 ) ) OR ( CHAIN K AND ( RESID 2:453 OR RESID 501:503 OR RESID 601:626 ) ) OR ( CHAIN L AND ( RESID 1:453 OR RESID 501:503 OR RESID 601:625 ) )L601 - 625

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more