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- PDB-9h0m: Structure of avian Pit54 SRCR 1-2 in complex with hemoglobin -

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Basic information

Entry
Database: PDB / ID: 9h0m
TitleStructure of avian Pit54 SRCR 1-2 in complex with hemoglobin
Components
  • (Hemoglobin subunit ...) x 2
  • PIT54 protein
KeywordsTRANSPORT PROTEIN / Acute phase protein / Hemoglobin scavenging
Function / homology
Function and homology information


Erythrocytes take up carbon dioxide and release oxygen / Erythrocytes take up oxygen and release carbon dioxide / Scavenging of heme from plasma / Cytoprotection by HMOX1 / Heme signaling / cellular oxidant detoxification / hemoglobin binding / haptoglobin-hemoglobin complex / hemoglobin complex / Neutrophil degranulation ...Erythrocytes take up carbon dioxide and release oxygen / Erythrocytes take up oxygen and release carbon dioxide / Scavenging of heme from plasma / Cytoprotection by HMOX1 / Heme signaling / cellular oxidant detoxification / hemoglobin binding / haptoglobin-hemoglobin complex / hemoglobin complex / Neutrophil degranulation / hydrogen peroxide catabolic process / oxygen carrier activity / oxygen binding / iron ion binding / heme binding / extracellular space / metal ion binding / membrane
Similarity search - Function
SRCR domain signature. / Scavenger receptor cysteine-rich domain / SRCR domain profile. / SRCR-like domain superfamily / Scavenger receptor Cys-rich / SRCR domain / Hemoglobin, pi / Hemoglobin, alpha-type / Hemoglobin, beta-type / : ...SRCR domain signature. / Scavenger receptor cysteine-rich domain / SRCR domain profile. / SRCR-like domain superfamily / Scavenger receptor Cys-rich / SRCR domain / Hemoglobin, pi / Hemoglobin, alpha-type / Hemoglobin, beta-type / : / Globin/Protoglobin / Globin / Globin / Globin domain profile. / Globin-like superfamily
Similarity search - Domain/homology
PROTOPORPHYRIN IX CONTAINING FE / Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D / Hemoglobin subunit alpha-A / Hemoglobin subunit beta
Similarity search - Component
Biological speciesGallus gallus (chicken)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.64 Å
AuthorsMikkelsen, J.H. / Andersen, C.B.F.
Funding support1items
OrganizationGrant numberCountry
Not funded
CitationJournal: To Be Published
Title: Structure of avian Pit54 SRCR 1-2 in complex with hemoglobin
Authors: Mikkelsen, J.H. / Andersen, C.B.F.
History
DepositionOct 8, 2024Deposition site: PDBE / Processing site: PDBE
Revision 1.0Oct 29, 2025Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Hemoglobin subunit alpha-A
B: Hemoglobin subunit beta
C: Hemoglobin subunit alpha-A
D: Hemoglobin subunit beta
E: PIT54 protein
F: PIT54 protein
G: Hemoglobin subunit alpha-A
H: Hemoglobin subunit beta
I: Hemoglobin subunit alpha-A
J: Hemoglobin subunit beta
K: PIT54 protein
L: PIT54 protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)354,47731
Polymers347,39212
Non-polymers7,08519
Water00
1
A: Hemoglobin subunit alpha-A
B: Hemoglobin subunit beta
C: Hemoglobin subunit alpha-A
D: Hemoglobin subunit beta
E: PIT54 protein
F: PIT54 protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)177,78816
Polymers173,6966
Non-polymers4,09210
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
G: Hemoglobin subunit alpha-A
H: Hemoglobin subunit beta
I: Hemoglobin subunit alpha-A
J: Hemoglobin subunit beta
K: PIT54 protein
L: PIT54 protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)176,69015
Polymers173,6966
Non-polymers2,9949
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)101.534, 157.592, 175.689
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number18
Space group name H-MP21212
Space group name HallP22ab
Symmetry operation#1: x,y,z
#2: x+1/2,-y+1/2,-z
#3: -x+1/2,y+1/2,-z
#4: -x,-y,z

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Components

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Hemoglobin subunit ... , 2 types, 8 molecules ACGIBDHJ

#1: Protein
Hemoglobin subunit alpha-A / Alpha-A-globin / Hemoglobin alpha-A chain


Mass: 15453.880 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Source: (natural) Gallus gallus (chicken) / References: UniProt: P01994
#2: Protein
Hemoglobin subunit beta / Beta-globin / Hemoglobin beta chain


Mass: 16489.115 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Source: (natural) Gallus gallus (chicken) / References: UniProt: P02112

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Protein , 1 types, 4 molecules EFKL

#3: Protein
PIT54 protein


Mass: 54905.051 Da / Num. of mol.: 4
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Gallus gallus (chicken) / Gene: PIT54 / Production host: Cricetulus griseus (Chinese hamster) / References: UniProt: A0A8V0XEL0

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Sugars , 2 types, 3 molecules

#4: Polysaccharide beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1- ...beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 732.682 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][a-L-Fucp]{}}LINUCSPDB-CARE
#5: Polysaccharide alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 367.349 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
LFucpa1-6DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(6+1)][a-L-Fucp]{}}LINUCSPDB-CARE

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Non-polymers , 2 types, 16 molecules

#6: Chemical
ChemComp-HEM / PROTOPORPHYRIN IX CONTAINING FE / HEME


Mass: 616.487 Da / Num. of mol.: 8 / Source method: obtained synthetically / Formula: C34H32FeN4O4 / Feature type: SUBJECT OF INVESTIGATION
#7: Chemical
ChemComp-CA / CALCIUM ION


Mass: 40.078 Da / Num. of mol.: 8 / Source method: obtained synthetically / Formula: Ca / Feature type: SUBJECT OF INVESTIGATION

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Details

Has ligand of interestY
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity % sol: 39.2 %
Crystal growTemperature: 281 K / Method: vapor diffusion, sitting drop / pH: 7.6 / Details: 0.3 M Ammonium tartrate 20% PEG3350

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: PETRA III, EMBL c/o DESY / Beamline: P14 (MX2) / Wavelength: 0.9762 Å
DetectorType: DECTRIS EIGER X 16M / Detector: PIXEL / Date: Nov 11, 2021
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9762 Å / Relative weight: 1
ReflectionResolution: 2.64→58.68 Å / Num. obs: 55820 / % possible obs: 95.51 % / Redundancy: 5.62 % / Biso Wilson estimate: 66.55 Å2 / CC1/2: 0.998 / Rrim(I) all: 0.117 / Net I/σ(I): 11.92
Reflection shellResolution: 2.64→2.84 Å / Mean I/σ(I) obs: 1.55 / Num. unique obs: 2792 / CC1/2: 0.5531 / Rrim(I) all: 1.345

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Processing

Software
NameVersionClassification
PHENIX1.21.2_5419refinement
XDSdata reduction
XDSdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.64→58.68 Å / SU ML: 0.3343 / Cross valid method: FREE R-VALUE / σ(F): 1.35 / Phase error: 31.0767
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.238 1831 3.28 %
Rwork0.2014 53989 -
obs0.2026 55820 67.11 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 69.39 Å2
Refinement stepCycle: LAST / Resolution: 2.64→58.68 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms15320 0 474 0 15794
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.004216190
X-RAY DIFFRACTIONf_angle_d0.839422099
X-RAY DIFFRACTIONf_chiral_restr0.05072426
X-RAY DIFFRACTIONf_plane_restr0.01382811
X-RAY DIFFRACTIONf_dihedral_angle_d11.70272358
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.64-2.710.3843130.3544388X-RAY DIFFRACTION6.34
2.71-2.790.3733420.34891237X-RAY DIFFRACTION20.23
2.79-2.880.386760.34062191X-RAY DIFFRACTION35.92
2.88-2.990.4057890.33422731X-RAY DIFFRACTION44.49
2.99-3.110.33261150.31273191X-RAY DIFFRACTION52.56
3.11-3.250.36431220.29993869X-RAY DIFFRACTION62.89
3.25-3.420.29311600.27574464X-RAY DIFFRACTION72.62
3.42-3.630.27231700.23375075X-RAY DIFFRACTION82.31
3.63-3.910.27571940.20595766X-RAY DIFFRACTION93.58
3.91-4.310.22242030.18116173X-RAY DIFFRACTION99.45
4.31-4.930.20092140.15876214X-RAY DIFFRACTION99.72
4.93-6.210.23262160.1866251X-RAY DIFFRACTION99.65
6.21-58.680.18462170.17196439X-RAY DIFFRACTION98.67
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
13.62823859521-0.8948802427740.2332786688062.364529751130.2982555709224.64438765980.07566498405520.2294217747870.08625840125540.666867954222-0.000432946906471-0.891579884420.1929147652111.059024097-0.03641882527620.3012668521150.139452745887-0.1196802570740.83589759867-0.02729811513370.90368558714234.322993487710.712540774233.4745376824
23.12570840087-1.160189690810.9158419257242.65157970875-1.767571727445.77481098543-0.120253905744-0.00539813797510.137955343438-0.532805477657-0.201486041467-0.883307650030.918554432537-0.7694577496820.2025376971620.377138168232-0.04746582594830.06145913695840.313778700222-0.05827612689250.53420560373724.89828674975.3261921105914.2717016232
33.46992041619-0.1525812143224.000787783892.129740293560.8010353633955.072652050950.3803659461380.8459531505-1.053824908180.563503364723-0.368519628324-0.1250015568410.3677200474550.636909753922-0.06771198195760.7968988849120.01773427999770.2780739802050.552713038614-0.02795715176190.70615778288226.34462137531.263668761224.63405918098
43.158815552481.39244200591-1.169184208876.396423554992.644259012556.3986749810.4162265386160.474483816976-1.12973914761-0.695257195989-0.18152459597-1.735510261031.066134515891.27117224044-0.3616418221530.464339743080.2048679483030.1829383267290.3360272044460.1069681766920.92334761888534.5795704311.963983523317.3993387833
52.16586441886-1.30286865909-0.2298504878761.05257631971-0.8195973086054.213273244790.117764134785-0.3091589367921.12053287537-0.0350203923674-0.369853169683-1.0846331906-0.8169120393931.360039945180.248297136390.503300813809-0.007468388451830.04384815956221.076413313530.2408582417061.2679374312844.179362930511.712776766925.0057634567
65.59284629484-0.7187262150111.880856710132.550233690443.079745907686.02432518002-0.6601449586161.246904336710.420186078339-1.727358094730.152393440614-2.04572694057-1.382727134832.221898198310.1835631230390.768466408938-0.2186952481450.2236271809631.054203122880.08790586159560.93485501046840.543097198213.93810508939.13499384389
73.95560998112-0.305488379973-0.07803165317662.87304188239-0.5259095507695.934991183480.0414551125714-0.307991517665-0.0638477203119-0.1633360695990.00168076825895-0.623961470909-0.3270313555880.2176922701530.05088110365070.3259984000870.02971711349430.1130830906450.2859074746680.006090232809890.37851765392725.256675868111.372013748519.4146363368
81.150939230480.695450145594-1.145158323652.91123094281-1.492111536591.390660532870.567802277549-0.665203478469-0.395331089310.5760967108430.08480568359020.0903852843611-0.034095734018-0.134224570453-0.1514093774030.287218864302-0.6468807091510.0998678923101-0.00310653184524-0.1108023762880.64126090120322.22070806456.7535665274632.8039187132
97.786821289541.91759195454-4.812308747232.72261074658-2.0418229783.400660300230.246544268165-0.527391923197-0.7273254220180.413241396662-0.505719520749-0.0807741616279-0.3031423664031.05028425867-0.00418705442190.383878172024-0.167760616517-0.01860202526490.4984199097050.05706768366060.73647533808131.599929152815.780443075426.058019535
100.002724994985680.0006078786541860.0001700613664810.00261583736114-0.00136143453292-0.001452869337840.2232960920621.220057206621.94465291973-0.748475756043-0.635365107523-0.554088160969-0.8373789189960.8274665154190.2387095343031.404138232540.219450224557-0.1431323698191.438754054250.324771711811.6322127014440.942152664922.799034020912.0994793013
116.70489672151-0.5558245503141.188915332996.663099627320.8223059567046.102130045260.01513907962650.96397879477-0.821795756509-0.923034702422-0.1185821009680.5257417658490.3083623642790.05409763889410.07324035146930.428937999073-0.00319983476779-0.002720629219020.3651231505770.006277773523270.3443516318573.8597544261711.318180962716.0522676505
124.62374679962-1.763800821271.869924722925.252391116451.872669844396.214677464810.084008092688-0.3810948887610.649161069065-0.1712938618820.0029684316458-1.36239229369-0.525291763810.6237186624720.002872607252730.284334215951-0.0388777672162-0.08323133617520.343920122535-0.03998469262160.42538695206118.097523214323.947245387734.9006546805
131.81150879586-0.490459716242-0.544021760773.51494075201-0.9288163427792.4232999698-0.03334457612330.01222411858840.0547926554264-0.132071917280.03392556202450.141878513421-0.06246371748020.0449961479093-0.002074003376860.2935283712880.02740458216890.006696664625850.302433732148-0.06446070224270.3213815724346.1017152495927.507499981223.5310297129
142.887175275850.0572994247250.9374058829329.34402988132-0.3014813000562.46190786524-0.1789058874230.667060023563-0.9756815135-0.6773061695640.120634145627-1.357306659370.1605241626420.1663974702280.03782175522520.3436438722820.005651533627490.08062544003630.354068805602-0.1416746650150.44149606979215.589983142715.814409471723.5027656721
152.88588561917-2.843797810470.6690796512153.76893934688-0.03439955303972.164478892470.206105125721-0.099520161355-0.113827043154-0.413162350418-0.203539108615-0.6765739542940.08691531268470.8534373813450.02871618893460.487854336559-0.03646149869920.1437918763610.353947070577-0.02578192536530.40371800010211.845911018215.708445004715.7265898545
162.69224642468-0.4301135249910.8425100671955.255468391294.442512223954.293820461090.01315671591310.616938693898-0.0543209594571-0.400171566141-0.5553140610580.0539440412406-0.465065216832-0.988561368374-0.1996741235350.5560095691990.2406581354650.5702923204080.5674738080320.04304531267390.35075883738910.011805694436.524593033514.7741187797
176.62931654018-3.936640266281.396786822094.71917594414-0.6670785996633.854897430050.4479822977110.124388424021-0.743046850976-0.267545569037-0.448622099326-0.09529923656950.1271119201631.573856170760.09800515895780.480736269631-0.1834027670320.01284893763741.25807059409-0.02540008402460.63599332872948.520770672337.41570363026.64367762085
180.671071405164-0.907774372546-1.409180335571.279201070441.942111792872.96815605808-0.1543457329080.4900160662410.897971985581-0.07164298081110.256693458523-0.187439757485-0.3444677088621.10176254821-0.2391239680940.85583335548-0.425531303580.04685153901171.01177096622-0.3138363891351.1961091767441.964656162850.42727945286.94961326433
197.224600757952.10731635611-1.475250521052.95016095078-0.8758429997755.004418557460.3108858469530.1100394804130.9391041358020.1816337103180.06837274673860.21430916905-0.6215348593570.02515397802-0.4156132430940.513557256129-0.01816170092020.0301149908870.360508531905-0.1002595335770.49994153077325.200506044645.116285138612.1840207753
207.90058358910.0740685730092-2.542966003068.333716149012.243662010354.12953204380.4011526199840.4687551886610.626175604009-0.491708723465-0.401081816866-0.949633992713-2.04301926841-0.202425993377-0.5339555929370.8544878940850.110696980436-0.01828800156030.376259694586-0.06090484662260.88226797192120.711869459250.267570830518.9533397687
213.9239954242-0.118953944433-0.982455897655.47955769275-0.5336993211375.89634387858-0.04608207187130.1933767835451.578949916810.856240030423-0.0851242859808-0.408456583793-0.5672775374451.096756229450.04219339789890.694349735977-0.246329962123-0.02662956121950.724467312051-0.1055755731980.58942685787735.733629901448.945222362317.0692293951
226.868585649110.384937546982-0.9459321501544.66314909186-0.8556849282063.753360587280.169358421243-1.95296042739-0.06135345379950.707533757701-0.270274904545-0.1954349171850.002713247373791.849253796050.2777032160090.637531065494-0.138909390356-0.05539400428891.19940045671-0.08977034456720.6925040984741.903375567538.671775618322.7893689374
237.140053888150.7359561588374.474556062461.034595286540.5765319739512.8238069754-0.705986163936-0.456739521819-0.8920175386551.88554612787-0.0391539826947-0.296582491950.7373201190910.1937653215440.2571044669740.790948852759-0.02497952778860.06871992202270.6702971536910.1265482718710.8441714780528.742771335834.850199356826.3799445939
242.91286310484-0.559919199552-1.361435922032.03238596495-1.415364402595.130117653080.05907512003250.144994751532-0.2622158743631.02023459658-0.22965584848-0.971235840183-1.310666653750.839287659670.01727519937660.626437085454-0.2592247391270.02159543407660.4380834954240.0240818240580.55372439558330.990874602339.98977567748.42301921812
252.06163277153-0.7776136135220.5051806963962.150628886530.4241795201565.56098405276-0.176319097041-0.3354655724550.28815143529-0.2660619894860.0131522410416-0.4356377483730.1663571347620.6657648398120.03442828503240.536091484073-0.08067371011670.09839585955620.833058283308-0.04870801590820.58868117284539.795273848237.32746766936.19531667914
260.2105821609940.08482023881350.1512615727740.0974547996453-0.1317710101220.66392599580.0845693455393-0.696612128473-1.259627186250.572871336609-0.5108255535870.7032916624861.55101367556-1.227350890730.4813033665980.770388095881-0.3919308433760.02961728223361.44568318567-0.08715053650572.0313709713234.071375449827.441412949624.8318156391
277.77174509951-2.50095642140.870931827915.965966783360.248453412136.01119538999-0.109390793304-0.2446358985250.7049326149720.428161709849-0.4488150282950.805947895167-0.480329419864-0.4078043531610.4936083091080.518575038881-0.0878908547189-0.03240224828250.331545447954-0.04507951641770.53514409586514.719975082340.8595320846-5.53225013654
285.7205789447-0.683469632840.6918140622562.796223846692.54046899512.605202597340.0837814855070.3788989905280.007662991145990.165388928841-0.0279531217237-0.5158780702350.6333949116640.537286261114-0.07248340652880.5671559337360.04136044653010.1508688765830.5717578607540.1108243665790.39675908578136.789893896526.7419206255-6.54799232918
292.03695395850.102347198056-1.227297878581.978934849620.3969123651233.69413452136-0.2729142471810.137017170254-0.282833833189-0.1673898077670.06540441364910.1120737413520.25086095008-0.2383118183160.1855069952010.514428866140.01879888891170.106699455610.343229719839-0.01990410033770.33710282964423.836877970325.0930712362-9.22282767906
303.61597010521.629156647360.2338010704647.1696283842-1.290739154072.170673597660.113392553434-0.0111320107131-0.136825796580.808968693945-0.940978826286-0.564160397111-0.1672966241950.5889015916270.09428850066920.424248569908-0.07997812353060.1063192113560.482111767452-0.1000300467810.24132842050628.17055293733.377520546-1.15508916483
315.126747655292.563472828640.03323750319924.624321130740.9569918206914.576389535990.111939277482-0.3186063208340.6335963553540.372051673174-0.5140977911510.803906701042-0.05934177294330.0481728834690.07690719738520.456521045996-0.004331280054340.1268683045710.2092864735690.0009701612613780.31181710550920.371690299538.04424937350.00785567193044
321.957283142480.184736982403-1.308601625030.4070764167180.07557408615822.66068947421-0.0382912191381-0.0721707213489-0.356935019989-0.126960938725-0.05059613000870.08913838932250.522791470522-0.612052756278-0.2016625690791.05134105954-0.3268699608310.3799914816140.8107017907660.1618941522590.0421297704316.816116992315.3961640758-0.314319294564
330.799185328248-0.6056727028030.209983810723.080768430712.098195099873.896474825640.164124870449-0.1233727319510.04763334162570.332887062477-0.3434924818110.6765248298880.110177226559-0.1336333913290.1044591126780.421681963818-0.0752477930699-0.006335305598930.4117238311390.02443342775230.395669118065-15.103811862313.694538825434.7207915725
343.08428943241-0.2613946252910.9845922512374.250513966-0.03037147764811.642911215490.04195517474730.422629747009-0.131036497995-0.243368880867-0.1496161112970.359169820852-0.0631835645178-0.08427432730220.09015129046330.33227455208-0.110864952548-0.0415865607910.382295633416-0.02071045451180.367673603678-14.959035774817.746037594929.2792703853
350.1628642107020.511086826172-0.07364419949251.80778451991-0.1631894214680.0807383057792-0.6384822211420.357205644484-0.314795508674-1.19531333782-0.06314490692171.676615404880.00730775589738-0.3889349942610.2082222570620.601213291713-0.2399066595720.0001397973092810.488466458969-0.04782689601081.23260684163-23.438002589431.71290788238.2193509
363.24949971686-0.774488816433-1.071539604983.49275932671-0.4802233044153.95932201397-0.102229106743-0.1769923886880.26915000478-0.2144400868380.02957710697940.118451410740.05276016332120.04776939853320.08931874336310.250870543033-0.0651565654516-0.02768438829690.285106835949-0.07772452355460.214463514131-7.6822518530443.236186711932.2648419014
379.49726304474-6.02520804371-3.089372120897.836969873261.838449238963.571400261990.9812023941580.5530362012370.218794784266-1.03002573372-0.694182944272-0.589482821627-0.1476715678480.204806333765-0.4300420311650.4935095597-0.0547576511904-0.01532318310260.718032052494-0.042360013230.39476364869618.900747234737.496065606-37.2395249781
383.141958150712.124853838341.222351307712.63914539581-0.3246602073395.127852791870.2282732115250.126951951888-0.164026107490.1223829756930.2098653876190.4538859710470.00109346355459-0.674027767591-0.448509785460.3290700490380.0144602873541-0.01597763011730.5381262817080.03601331931940.65546744197512.211292439335.2872656566-29.8991696738
392.219571893870.03357469748450.8638466962972.52346180993-2.823116480623.694834552990.310617012143-0.278106811485-0.451469501746-0.429568891976-0.4949394839610.7808280476380.534364722286-0.4204080520390.05826139076740.3708662254410.124178685729-0.03226104398370.577732520181-0.07620590490240.66087771450514.408967827531.6396119585-28.9183385882
405.55920431211-0.943916419293-0.4253623537.18706743729-1.977409962894.19511432348-0.6135345865710.703289303705-1.074469296570.03556953323310.1115406577980.7752257261322.16058856837-0.5707405713590.2618453596851.01493509439-0.05862851769380.01829282943960.494004786914-0.1552479252170.63236836481418.498859415212.1842881914-27.4415450748
411.94059576262-1.194982822590.2732609075322.898334347390.9844713338831.589612346620.5799509205590.0866720302327-0.578128597033-0.273828135356-0.2439516907040.4974050831841.644499776820.0997647570007-0.3709351759561.275949432970.01268351429990.02726945063070.539732026892-0.1291237363990.78612874361318.38059472417.15682419828-24.1791142814
425.96155415962-0.755133109756-1.157708913022.49992273589-0.3295763681935.09281017756-0.326426666438-0.1325226265330.1876989805220.2879647786690.2596280528080.203395383911-1.00461007032-1.083585239230.0194484183910.5537200273750.235750016733-0.09184907961250.699698791954-0.1171449489970.541186913695.7186383686552.74532372778.5014380762
433.29656744255-1.6954338403-1.896931093042.79781306363-0.7569042230742.63882805691-0.129952576328-0.01426394126121.151074119961.37082632181-0.841667075030.45183007956-1.50746094832-0.1766211618430.1323856518420.951797522027-0.266867424563-0.07994330345380.6030836476220.0007121864597821.1694809770719.337170847460.833245216470.8057334966
442.50305430821-1.20339778075-0.002986084436423.21311139712-0.3513218226433.19842618043-0.3539657962930.4118827552870.1837147562980.05249247823110.4390579675550.195007206574-0.175667051264-0.8038412291930.009690333918110.4583170421830.240708540189-0.06084168556650.778394983074-0.1250598663960.371512678524.1497657701249.665250027773.5014007866
459.817763496622.24444575341.697745321079.17727120149-4.586432885787.4099196698-0.0823163057150.7420675591230.593819184720.135768587819-0.307783029531-0.66256053887-1.49756574280.1624722726470.4523486753120.545367356161-0.0120001867102-0.09225454952790.621131659606-0.1084722450910.44879045827427.413879953248.973711417892.5260659826
464.639728732540.4144764234911.433444013382.36200009261.170521712353.08095417497-0.354942945666-0.545240213216-0.109610319690.1765185525530.2887772570920.4538934047780.0728428182956-0.632802722142-0.004121710437210.3881675067630.05410229475110.1171025197450.747455768493-0.09638335261360.3359983490756.6672484048435.861517157493.4406302773
472.11158714103-2.13723300956-1.128734721345.37064940201-0.2998064775511.67898010593-0.3943268270580.559133898991-0.604620496432-0.1188910134780.3323727252950.7735968095970.00830436287463-1.056853498740.09252331409240.489233506390.2941535347540.3262713726851.330724565430.1162422611620.488458224531-2.8822179792434.345995182196.8772609794
484.30620373401-0.7369711916281.463653743533.78954981017-1.26194957214.5943246734-0.322888806671-0.2647956302630.1418144587610.04776076777510.162072856739-0.486715725578-0.1286341774450.01974238473250.06123530561930.4653836589260.08929495692480.01637060666950.414656528402-0.129295298020.35322227384920.289072509933.660691235596.4720594952
491.46968712825-1.007887063392.043556416293.95214939224-3.231001165287.403065699880.5209584154091.81016004682-1.17948040928-0.650402430824-0.08094565998390.3935380316922.224402121250.563296786866-0.0860494469280.603501284029-0.160622893478-0.03457854892950.791752158037-0.4388163020330.55538678846215.164492747321.895556972188.6973089616
502.44958037323-1.593282146091.088718874165.432903837390.123064338124.37045046689-0.9419521525950.2197865838811.03233798745-0.6225574999060.472838138415-0.692202412734-1.37543404758-0.221998213774-0.1215656621270.6088401912330.3092589397330.1920695121550.889943045-0.467887219027-0.40940742439912.437533453243.832089009289.0804745118
516.39338789621-2.653747575561.239950802025.96463111047-3.653942337234.91597808266-0.2534809189290.8922780962510.0451500923706-0.770212187978-0.4099870119570.0264698953514-0.324147482096-1.195173384410.5721389015330.5611398548590.0345034062805-0.001428123027360.622093608867-0.09695997358040.31102141360220.856453181945.537637821987.215218631
520.627247152226-0.1998859388711.223783693476.936194730565.636972163927.972824378-0.2082766599240.574085313166-0.666047992548-1.24814687186-0.783863855054-1.289475659930.7072692569121.264583131220.8392142926130.5829175076320.1024648808160.3413523010760.8901179391780.07271233011390.96646764602824.075769850526.878241665786.0568774128
532.10452227077-0.0180368605828-0.3473862160572.10600941726-0.5522526317673.83215490277-0.1213963434930.610921433194-0.713531963699-0.105334774477-0.07061130600340.4843283375630.441625938344-0.5827121188890.06295299329110.578074557664-0.2561974811620.04059315230860.726268956903-0.2925891447060.7334963634025.592530248417.298986291765.3139339438
541.19118637387-2.147712744211.843223140165.64536953138-1.663881828014.47136641489-0.2902158180990.278106689667-0.7295238916090.921340521408-0.2681997959690.5681436894571.27254284905-1.11517130712-0.005821177982760.786669310463-0.5406150891280.3049695505141.10252429288-0.2908352272951.257545465332.1035733071610.468083378172.8009781069
552.519879547191.28188260140.1496044666541.92292386164-0.6761880978011.97890176561-0.3427315438380.327778374804-0.211979356097-0.104916591151-0.01978202291430.458274771260.190168560265-0.7961511180780.5368769033230.531109582469-0.177507013730.1217614778180.799512965961-0.2893094851630.6494598006332.7364541627423.615541278968.1439410173
563.40448335492-3.07955556687-0.3721464503866.19161998834-0.5261838179691.52041115197-0.1500459817910.224193708865-0.4889171088310.4529564449290.1805055859030.1686194434770.258329923987-0.2617572622370.03441630522590.473605222045-0.158789096351-0.02964232608980.465457170136-0.1477412860620.41544502416824.116385349725.5602697361.136294104
573.66298824739-0.227991666022-1.337873516734.16769649698-1.189202584221.65829941225-0.119130895797-0.29436944330.06064757495280.061631423551-0.0211986935723-0.394270834121-0.0479659058359-0.2660172633340.1305207305540.388660426963-0.0628441506769-0.05766333509460.441692563899-0.1886675388130.30391681826428.812459267832.796085812860.8472222607
583.97898723918-0.573244138371-0.8806228195415.81259287261-1.193932940182.331306394350.0486025540645-0.278882867932-0.3896198855910.995515091584-0.3988854030870.8565598216720.595127032005-0.2100784624130.3704901447470.558673089105-0.06249665491390.09236350906960.485438643138-0.06886727242410.36587350178422.500588137323.302255559966.962526238
595.947215510044.24864591872.043212738925.33480699246-0.3083319978752.744389282470.810124852085-1.620521285960.3711504085310.503663628825-1.1888099347-0.176029320378-0.00913264653573-1.265125371890.2638249945030.5137536859230.271879995111-0.03604566434561.26431207116-0.1925270623010.43732905308820.782675499440.5640953887125.115691723
603.98278196354-0.5072134121680.2960423115493.40421331731-0.7272399916834.575714378890.0969512530094-0.02764432089270.0664021976141-0.154886250431-0.256524252454-0.182956357687-0.217966615864-0.06446250815210.09113773764720.2800771900760.0396061387926-0.02384069683290.529195742079-0.1059288337480.32148473203627.085417299240.922621338116.141007018
613.46484030390.661311905174-3.850912148875.83101817484-1.077808528327.16443255351-0.328106391552-0.4516505950530.2060187042111.49194293917-0.523126673579-1.096254098180.5740068141921.14647960950.7453352773131.17661084402-0.269338021997-0.2713705322620.81510346436-0.1217692297260.54081072360227.349691302323.9044352356126.499375709
623.505541273580.6286508278730.7029175642863.52980950256-1.135488042315.388458472810.166453071213-0.112598196268-1.03645106350.03108010763090.240622287573-0.07906351327832.02169161452-0.27288666131-0.3065640147080.899223149486-0.103271871513-0.02874258938810.445376416316-0.01861204994730.61418625265523.334646104714.3907004269109.300574
635.16917495175-0.118348265040.6263609951994.17278614236-1.404265421654.25675154148-0.1215234258140.520977153951-1.685839711690.7166239173970.1474436369840.3678031197971.59196732984-1.05312986062-0.5441217261560.828948924894-0.1184116146660.151171884160.5991997377710.03326008309290.63147247360216.320081768813.7904172266111.254088826
642.266929776240.2434447449841.597520945923.40249975682-0.6549016940282.21168430953-0.1380168793670.0587864846272-0.557453615591-0.645431442659-0.10698042857-1.47722143070.644666065950.1065999738790.2354749599970.6592491251150.05887379554990.1736008726060.506240227031-0.08712221201190.91464130991348.727326940718.041382273451.9362390208
651.0384286372-0.763896965853-0.7342061437330.5857161902690.5839880208390.560774127693-0.627164635521-0.5065007889930.2228509509440.464941218192-0.244270500418-1.048787833930.8167446572140.9746722164160.9145294205640.7165310063070.1885268284320.05090826340190.910523512091-0.06321935663071.5679260996260.639343903232.257400316947.0998432737
663.17124304861.653531227610.2249071322634.34925063624-0.6808432777493.57817446390.1243124781570.1542983921060.6328605175830.0194215494735-0.215777304659-0.8949469702250.1579288608870.0003706578534680.06508435987090.2960419114640.0381989126309-0.02044470380320.443625586287-0.03740527432740.62627022149848.86688871145.05294884454.1036665622
671.513544182811.280870604440.6967538296293.76115731839-0.1253626744313.507378926010.375328851992-0.298010147760.09439017238380.52384608601-0.334817287638-1.16047122499-0.1424081043670.1293012507210.08227787190670.436360811692-0.0549339876138-0.1458950011610.653391382088-0.03418173085660.72450294280447.734297496846.85171017561.0719629653
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 2 through 17 )AA2 - 171 - 16
22chain 'A' and (resid 18 through 43 )AA18 - 4317 - 42
33chain 'A' and (resid 44 through 53 )AA44 - 5343 - 52
44chain 'A' and (resid 54 through 72 )AA54 - 7253 - 71
55chain 'A' and (resid 73 through 81 )AA73 - 8172 - 80
66chain 'A' and (resid 82 through 95 )AA82 - 9581 - 94
77chain 'A' and (resid 96 through 113 )AA96 - 11395 - 112
88chain 'A' and (resid 114 through 119 )AA114 - 119113 - 118
99chain 'A' and (resid 120 through 137 )AA120 - 137119 - 136
1010chain 'A' and (resid 138 through 142 )AA138 - 142137 - 141
1111chain 'B' and (resid 2 through 20 )BC2 - 201 - 19
1212chain 'B' and (resid 21 through 58 )BC21 - 5820 - 57
1313chain 'B' and (resid 59 through 100 )BC59 - 10058 - 99
1414chain 'B' and (resid 101 through 122 )BC101 - 122100 - 121
1515chain 'B' and (resid 123 through 142 )BC123 - 142122 - 141
1616chain 'B' and (resid 143 through 147 )BC143 - 147142 - 146
1717chain 'C' and (resid 2 through 14 )CE2 - 141 - 13
1818chain 'C' and (resid 15 through 21 )CE15 - 2114 - 20
1919chain 'C' and (resid 22 through 43 )CE22 - 4321 - 42
2020chain 'C' and (resid 44 through 53 )CE44 - 5343 - 52
2121chain 'C' and (resid 54 through 72 )CE54 - 7253 - 71
2222chain 'C' and (resid 73 through 89 )CE73 - 8972 - 88
2323chain 'C' and (resid 90 through 95 )CE90 - 9589 - 94
2424chain 'C' and (resid 96 through 113 )CE96 - 11395 - 112
2525chain 'C' and (resid 114 through 137 )CE114 - 137113 - 136
2626chain 'C' and (resid 138 through 142 )CE138 - 142137 - 141
2727chain 'D' and (resid 2 through 20 )DG2 - 201 - 19
2828chain 'D' and (resid 21 through 51 )DG21 - 5120 - 50
2929chain 'D' and (resid 52 through 100 )DG52 - 10051 - 99
3030chain 'D' and (resid 101 through 119 )DG101 - 119100 - 118
3131chain 'D' and (resid 120 through 142 )DG120 - 142119 - 141
3232chain 'D' and (resid 143 through 147 )DG143 - 147142 - 146
3333chain 'E' and (resid 64 through 97 )EI64 - 971 - 34
3434chain 'E' and (resid 98 through 165 )EI98 - 16535 - 102
3535chain 'E' and (resid 166 through 176 )EI166 - 176103 - 113
3636chain 'E' and (resid 177 through 278 )EI177 - 278114 - 215
3737chain 'F' and (resid 64 through 76 )FP64 - 761 - 13
3838chain 'F' and (resid 77 through 148 )FP77 - 14814 - 85
3939chain 'F' and (resid 149 through 176 )FP149 - 17686 - 113
4040chain 'F' and (resid 177 through 207 )FP177 - 207114 - 144
4141chain 'F' and (resid 208 through 278 )FP208 - 278145 - 215
4242chain 'G' and (resid 2 through 43 )GW2 - 431 - 42
4343chain 'G' and (resid 44 through 53 )GW44 - 5343 - 52
4444chain 'G' and (resid 54 through 139 )GW54 - 13953 - 138
4545chain 'H' and (resid 2 through 16 )HY2 - 161 - 15
4646chain 'H' and (resid 17 through 46 )HY17 - 4616 - 45
4747chain 'H' and (resid 47 through 58 )HY47 - 5846 - 57
4848chain 'H' and (resid 59 through 94 )HY59 - 9458 - 93
4949chain 'H' and (resid 95 through 100 )HY95 - 10094 - 99
5050chain 'H' and (resid 101 through 122 )HY101 - 122100 - 121
5151chain 'H' and (resid 123 through 141 )HY123 - 141122 - 140
5252chain 'H' and (resid 142 through 146 )HY142 - 146141 - 145
5353chain 'I' and (resid 2 through 43 )IZ2 - 431 - 42
5454chain 'I' and (resid 44 through 72 )IZ44 - 7243 - 71
5555chain 'I' and (resid 73 through 139 )IZ73 - 13972 - 138
5656chain 'J' and (resid 2 through 46 )JAA2 - 461 - 45
5757chain 'J' and (resid 47 through 100 )JAA47 - 10046 - 99
5858chain 'J' and (resid 101 through 146 )JAA101 - 146100 - 145
5959chain 'K' and (resid 64 through 76 )KBA64 - 761 - 13
6060chain 'K' and (resid 77 through 165 )KBA77 - 16514 - 102
6161chain 'K' and (resid 166 through 176 )KBA166 - 176103 - 113
6262chain 'K' and (resid 177 through 267 )KBA177 - 267114 - 204
6363chain 'K' and (resid 268 through 278 )KBA268 - 278205 - 215
6464chain 'L' and (resid 64 through 165 )LDA64 - 1651 - 102
6565chain 'L' and (resid 166 through 176 )LDA166 - 176103 - 113
6666chain 'L' and (resid 177 through 241 )LDA177 - 241114 - 178
6767chain 'L' and (resid 242 through 278 )LDA242 - 278179 - 215

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