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- PDB-9e7e: Crystal structure of HIV-1 RRE SLII A31CG39C mutant in complex wi... -

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Basic information

Entry
Database: PDB / ID: 9e7e
TitleCrystal structure of HIV-1 RRE SLII A31CG39C mutant in complex with Fab BL3-6
Components
  • BL3-6 Fab heavy chain
  • BL3-6 Fab light chain
  • Rev Response Element SLII A31C/G39C
KeywordsRNA / HIV-1 / Replication / Fab / Chaperone / Rev response element
Function / homology: / RNA / RNA (> 10)
Function and homology information
Biological speciesHomo sapiens (human)
Human immunodeficiency virus 1
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.75 Å
AuthorsOjha, M. / Koirala, D.
Funding support United States, 1items
OrganizationGrant numberCountry
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)U54AI170660-01/SUBK00019302 United States
CitationJournal: To Be Published
Title: Crystal structure of HIV-1 RRE SLII A31CG39C mutant in complex with Fab BL3-6
Authors: Ojha, M. / Koirala, D.
History
DepositionNov 1, 2024Deposition site: RCSB / Processing site: RCSB
Revision 1.0May 28, 2025Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
H: BL3-6 Fab heavy chain
L: BL3-6 Fab light chain
R: Rev Response Element SLII A31C/G39C
A: BL3-6 Fab heavy chain
B: BL3-6 Fab light chain
C: Rev Response Element SLII A31C/G39C
F: Rev Response Element SLII A31C/G39C
D: BL3-6 Fab heavy chain
E: BL3-6 Fab light chain
O: Rev Response Element SLII A31C/G39C
G: BL3-6 Fab heavy chain
I: BL3-6 Fab light chain


Theoretical massNumber of molelcules
Total (without water)285,43712
Polymers285,43712
Non-polymers00
Water2,882160
1
H: BL3-6 Fab heavy chain
L: BL3-6 Fab light chain
R: Rev Response Element SLII A31C/G39C


Theoretical massNumber of molelcules
Total (without water)71,3593
Polymers71,3593
Non-polymers00
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
A: BL3-6 Fab heavy chain
B: BL3-6 Fab light chain
C: Rev Response Element SLII A31C/G39C


Theoretical massNumber of molelcules
Total (without water)71,3593
Polymers71,3593
Non-polymers00
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
F: Rev Response Element SLII A31C/G39C
D: BL3-6 Fab heavy chain
E: BL3-6 Fab light chain


Theoretical massNumber of molelcules
Total (without water)71,3593
Polymers71,3593
Non-polymers00
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
4
O: Rev Response Element SLII A31C/G39C
G: BL3-6 Fab heavy chain
I: BL3-6 Fab light chain


Theoretical massNumber of molelcules
Total (without water)71,3593
Polymers71,3593
Non-polymers00
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)84.369, 95.645, 111.239
Angle α, β, γ (deg.)77.480, 76.340, 74.250
Int Tables number1
Space group name H-MP1
Space group name HallP1
Symmetry operation#1: x,y,z
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
d_1ens_1(chain "A" and (resid 3 through 89 or resid 91 through 139 or resid 141 through 228))
d_2ens_1(chain "D" and (resid 3 through 89 or resid 91 through 139 or resid 141 through 228))
d_3ens_1(chain "H" and (resid 3 through 89 or resid 91 through 139 or resid 141 through 228))
d_1ens_2(chain "B" and (resid 3 through 24 or resid 26...
d_2ens_2(chain "E" and (resid 3 through 24 or resid 26...
d_3ens_2(chain "I" and (resid 3 through 24 or resid 26...
d_4ens_2(chain "L" and (resid 3 through 24 or resid 26...

NCS domain segments:
Dom-IDComponent-IDEns-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
d_11ens_1SERSERLEULEUAD3 - 893 - 89
d_12ens_1ALAALASERSERAD91 - 13991 - 139
d_13ens_1LYSLYSCYSCYSAD141 - 228141 - 228
d_21ens_1SERSERLEULEUDH3 - 893 - 89
d_22ens_1ALAALASERSERDH91 - 13991 - 139
d_23ens_1LYSLYSCYSCYSDH141 - 228141 - 228
d_31ens_1SERSERLEULEUHA3 - 893 - 89
d_32ens_1ALAALASERSERHA91 - 13991 - 139
d_33ens_1LYSLYSCYSCYSHA141 - 228141 - 228
d_11ens_2ILEILECYSCYSBE3 - 243 - 24
d_12ens_2ALAALAGLYGLYBE26 - 10026 - 100
d_13ens_2GLYGLYILEILEBE102 - 107102 - 107
d_14ens_2ARGARGSERSERBE109 - 122109 - 122
d_15ens_2GLUGLUGLUGLUBE124 - 214124 - 214
d_21ens_2ILEILECYSCYSEI3 - 243 - 24
d_22ens_2ALAALAGLYGLYEI26 - 10026 - 100
d_23ens_2GLYGLYILEILEEI102 - 107102 - 107
d_24ens_2ARGARGSERSEREI109 - 122109 - 122
d_25ens_2GLUGLUGLUGLUEI124 - 214124 - 214
d_31ens_2ILEILECYSCYSIL3 - 243 - 24
d_32ens_2ALAALAGLYGLYIL26 - 10026 - 100
d_33ens_2GLYGLYILEILEIL102 - 107102 - 107
d_34ens_2ARGARGSERSERIL109 - 122109 - 122
d_35ens_2GLUGLUGLUGLUIL124 - 214124 - 214
d_41ens_2ILEILECYSCYSLB3 - 243 - 24
d_42ens_2ALAALAGLYGLYLB26 - 10026 - 100
d_43ens_2GLYGLYILEILELB102 - 107102 - 107
d_44ens_2ARGARGSERSERLB109 - 122109 - 122
d_45ens_2GLUGLUGLUGLULB124 - 214124 - 214

NCS ensembles :
ID
ens_1
ens_2

NCS oper:
IDCodeMatrixVector
1given(0.958059730623, -0.285979431502, -0.0183662003977), (0.284998093635, 0.957550978919, -0.0432690350701), (0.0299606272208, 0.0362199879829, 0.998894625717)-14.995913312, -20.9674739237, 60.9257239063
2given(-0.999960411306, -0.00824318522683, -0.00335048039954), (-0.00641931893502, 0.929054273748, -0.369887751587), (0.00616183138377, -0.369851600412, -0.929070409338)-80.1332335178, -9.03709848223, -46.2968100528
3given(0.963373336837, -0.267302750354, -0.0214721569748), (0.266445863487, 0.963177209586, -0.0360036770976), (0.0303053741498, 0.0289638151378, 0.999120954495)-15.1929430463, -21.4693691853, 61.1095644477
4given(-0.986125406583, -0.112394220108, 0.122164732138), (-0.145300162403, 0.94029624621, -0.307783742536), (-0.080277925344, -0.321263923667, -0.943580916537)-91.9737807874, -48.7149777205, 8.95583682553
5given(-0.999685011872, -0.0222035984338, -0.0116994553206), (-0.0163442706128, 0.929725272288, -0.367890993214), (0.0190457831643, -0.367583892855, -0.929795321486)-79.9634960557, -9.35881734549, -45.9675152712

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Components

#1: Antibody
BL3-6 Fab heavy chain


Mass: 24766.615 Da / Num. of mol.: 4
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Production host: Escherichia coli (E. coli)
#2: Antibody
BL3-6 Fab light chain


Mass: 23394.891 Da / Num. of mol.: 4
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Production host: Escherichia coli (E. coli)
#3: RNA chain
Rev Response Element SLII A31C/G39C


Mass: 23197.859 Da / Num. of mol.: 4 / Mutation: A31C, G39C / Source method: obtained synthetically / Source: (synth.) Human immunodeficiency virus 1 / References: GenBank: 902798
#4: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 160 / Source method: isolated from a natural source / Formula: H2O
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.9 Å3/Da / Density % sol: 57.61 %
Crystal growTemperature: 298 K / Method: vapor diffusion, sitting drop / pH: 5.1 / Details: 0.2 M Ammonium citrate dibasic, 20% PEG 3,350 / PH range: 5.0-6.0

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Data collection

DiffractionMean temperature: 100 K / Ambient temp details: Liquid nitrogen / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: NSLS-II / Beamline: 17-ID-2 / Wavelength: 0.97934 Å
DetectorType: DECTRIS EIGER X 16M / Detector: PIXEL / Date: Oct 5, 2024
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.97934 Å / Relative weight: 1
ReflectionResolution: 2.75→106.64 Å / Num. obs: 160531 / % possible obs: 99 % / Redundancy: 3.6 % / Biso Wilson estimate: 65.3 Å2 / CC1/2: 0.832 / Rmerge(I) obs: 0.105 / Net I/σ(I): 15.8
Reflection shellResolution: 2.75→2.8 Å / Redundancy: 3.8 % / Rmerge(I) obs: 1.634 / Mean I/σ(I) obs: 0.9 / Num. unique obs: 4084 / CC1/2: 0.305 / % possible all: 97.6

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Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
XDSdata reduction
Aimlessdata scaling
PHENIXphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.75→49.66 Å / SU ML: 0.5137 / Cross valid method: FREE R-VALUE / σ(F): 1.96 / Phase error: 34.8227
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.293 3904 2.43 %
Rwork0.2503 156627 -
obs0.2513 160531 96.56 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 132.19 Å2
Refinement stepCycle: LAST / Resolution: 2.75→49.66 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms13308 6152 0 170 19630
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.010420492
X-RAY DIFFRACTIONf_angle_d1.356429212
X-RAY DIFFRACTIONf_chiral_restr0.06353516
X-RAY DIFFRACTIONf_plane_restr0.01052652
X-RAY DIFFRACTIONf_dihedral_angle_d18.62678312
Refine LS restraints NCS
Ens-IDDom-IDAsym-IDAuth asym-IDRefine-IDTypeRms dev position (Å)
ens_1d_2DAX-RAY DIFFRACTIONTorsion NCS0.619767992694
ens_1d_3DAX-RAY DIFFRACTIONTorsion NCS0.908139370843
ens_2d_2EBX-RAY DIFFRACTIONTorsion NCS0.820555623114
ens_2d_3EBX-RAY DIFFRACTIONTorsion NCS1.79962723375
ens_2d_4EBX-RAY DIFFRACTIONTorsion NCS0.787461836274
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.75-2.790.38691380.37825497X-RAY DIFFRACTION93.33
2.79-2.820.38051360.36025483X-RAY DIFFRACTION95.14
2.82-2.860.37861340.35935334X-RAY DIFFRACTION93.98
2.86-2.90.40181370.34235613X-RAY DIFFRACTION95.23
2.9-2.940.36471360.3535461X-RAY DIFFRACTION94.64
2.94-2.980.36421430.34785574X-RAY DIFFRACTION95.92
2.98-3.030.45691390.37555539X-RAY DIFFRACTION95.33
3.03-3.080.3891360.33785492X-RAY DIFFRACTION95.81
3.08-3.130.37481390.32735581X-RAY DIFFRACTION96.13
3.13-3.190.34111400.32125570X-RAY DIFFRACTION96.19
3.19-3.250.34821430.325576X-RAY DIFFRACTION96.54
3.25-3.320.36681360.29925600X-RAY DIFFRACTION96.73
3.32-3.390.33021420.29125649X-RAY DIFFRACTION96.61
3.39-3.470.28731400.2965544X-RAY DIFFRACTION96.96
3.47-3.560.35431400.29695612X-RAY DIFFRACTION96.51
3.56-3.650.38631370.28535613X-RAY DIFFRACTION96.8
3.65-3.760.32681390.26695602X-RAY DIFFRACTION96.85
3.76-3.880.28041390.25315660X-RAY DIFFRACTION97.2
3.88-4.020.33741410.2435641X-RAY DIFFRACTION97.18
4.02-4.180.28361370.2215624X-RAY DIFFRACTION97.48
4.18-4.370.27181430.21695711X-RAY DIFFRACTION98.25
4.37-4.60.25111400.19765656X-RAY DIFFRACTION98.4
4.6-4.890.221440.1965696X-RAY DIFFRACTION98.52
4.89-5.270.27161390.20395754X-RAY DIFFRACTION98.41
5.27-5.790.28671420.22565617X-RAY DIFFRACTION97.91
5.79-6.630.2691400.23925650X-RAY DIFFRACTION97.74
6.63-8.350.27811420.23955740X-RAY DIFFRACTION98.39
8.35-49.660.21731420.20435538X-RAY DIFFRACTION95.56
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
18.820079172415.48765298063-3.092071632066.06152593671-0.3129670217883.056922433540.0608544545426-0.303721111097-1.06118312317-0.554269764887-0.0838768813972-0.7594014982910.1746032263090.198296045740.003693550568220.4576337154710.147584149232-0.1139318180960.5410187528780.1356069892330.626298470613-27.7821021342-1.44921431582-10.5564955857
25.373153169322.05034317044-0.03525465847761.317860922730.0481281558071.3995027420.654487075315-0.7532946293780.06525648531310.321847458817-0.452827806837-0.0524706304763-0.332129303454-0.0279099364208-0.1910559361020.605409597743-0.0507387609784-0.03661629811980.504021976549-0.001596702490530.499100024134-32.91667399391.14901904076-4.0418803146
33.604595156421.56569424685-2.324274617332.212323178860.5292227335243.03591997303-0.779292031033-1.339139855960.1256350527020.2911420659850.9469082588791.1069219545-1.23465384266-0.700348426728-0.1338374625270.7391950797850.362387047597-0.113149495190.841991117570.02283627853190.75770402309-72.13553824180.778322486472-14.1166995178
43.428885276690.92730131302-1.278561175423.85778542591.633820160591.607189726470.0860422481145-0.05085695971210.300585454271-0.836439991161-0.415017282226-0.2987378236210.08673651627330.01416776718520.3212513449140.4253635409370.21904601946-0.00325081944860.5730521083720.03049454365540.511192699848-58.7789027684-2.32018053808-14.8044045683
54.079891864580.2843348464490.7861907845785.31221850316-0.4404563160743.410882494070.1414825740690.7248004872790.354431072983-0.757143969409-0.005622425329340.834767753884-0.130475712695-0.929885633804-0.1286034256670.694096768030.3114177173-0.1189511258690.8239084005360.04909608220010.648390565067-67.701061859-4.92073921713-19.6182371491
63.639685894240.81912169199-0.4937254421861.701803020910.6090061221930.6152011328090.481790950127-1.193433970141.097412723630.337945129138-0.2324805417090.432523784365-0.75937295339-0.271943669319-0.003146400842931.03226377718-0.07730596649620.1917608359940.623100259815-0.3303754930130.935208373028-39.464638653621.6172237713-1.1521462071
73.48745995054-0.680253739707-0.7728427148660.1515569736770.02494277094561.416098714210.273165452683-0.078540478081.038743517650.156754173004-0.2052456133530.351439186953-1.118248059970.0682881473052-0.0007625983063261.041400479590.05065839192270.1794155799910.381362681499-0.1041410452191.04639145607-39.112354823320.6326250862-7.84221923697
83.40563307190.1205638645090.1976266450674.95283254403-0.900743911941.746642690080.154121854304-0.8637693961350.427102206799-0.0789932899637-0.1984510920910.231227371978-0.650654956864-0.511512907171-0.05888054873020.6942983577490.403762120712-0.09512517765460.907358334619-0.1703014281950.703666814165-67.17002015425.29981285734-5.84093360965
91.46228681810.229467063928-0.4821737619345.55413931761-1.725317791433.01817403693-0.0103153860576-0.6909090448010.8012475781610.5856987624380.4250104238230.894841107197-0.473552933528-1.38690470905-0.3531929118010.567725394870.49907193304-0.03901054466361.07503987751-0.1138540967140.88869454361-74.01917537794.0862818473-2.07224349725
104.57293367749-1.10185476389-0.9218722034775.418066794162.525330813663.34744620689-0.7521237923530.9755205254820.162442034822.0453195017-0.610103497984-1.5374424081.91284228361.609432417430.7741785128772.250223271790.00687799123911-0.1745063897872.520816977940.5125390746021.56484916603-6.6030966076122.975373580730.4797838918
113.69893398544-1.80518329413-0.632703382032.63406444148-2.780754152075.52620851583-1.358629909170.43218814679-1.5579102875-3.575630443390.4194332825413.271873459251.45080465325-0.2945092936140.3762681032554.136296897240.446004956783-1.818807803794.21735307794-1.026904438234.95092126411-4.152280427643.9724200437330.7606741636
127.419790799021.521054318286.095860520555.386496139135.363083690298.36829844751-1.49953201365-0.900029968906-0.02054772689031.519673310180.136993561853-1.60342745235-0.4560118725212.766264511971.564202253121.49666253798-0.402514513459-0.3424695115422.747591826860.2729335553031.713517718252.8903741710119.900935931817.4218796413
135.105009916070.877857623105-0.9327208195084.38728893847-2.138027366672.655235594570.271784410505-1.132883106870.1203510249480.5344279333220.069836203543-1.10439932138-1.004637065030.43252484129-0.4693180959110.88758400823-0.3589668103870.01416548358760.981145753486-0.1462628856170.957942571022-8.6238875464115.94150443251.91745049461
146.85757774076.13811018147-2.106619122347.24661651298-4.511796507494.628934858120.6566460118480.286788111554-1.039699399240.7737768767490.349422633697-1.07796712479-1.7401302351-0.533623833045-0.08045423648991.844555994170.0770122168712-0.02225192387851.74166818046-0.2332067974991.08130623611-13.423519328527.64187243528.1424195537
158.7221114876-1.94686748761-0.9710556351941.95693336875-0.4715912298975.710880242110.0470647911863-0.773700205714-0.418634012306-0.01715556478940.37612678209-0.430269122718-1.05093033028-0.086312233130.02100531707210.9361298389080.0795993500561-0.2569104131020.2924692808370.07115022087330.586367777994-46.5519978415-8.8556038725-35.3944657127
163.435714517970.331826348641.964013500043.295343667990.5052461638795.348234901510.02297760985490.13842419322-0.244855488267-0.514062357850.125657347815-0.300638629877-0.952547867554-0.299713648273-0.1491130821880.995700604220.0901439137864-0.009754902734130.31530058026-0.03975917116510.520278690648-51.4295474046-7.35658508869-43.6156980278
172.404924762210.77877243212.339691166121.92187933070.4607627090213.51722413653-0.3081931636310.304148930816-0.863889251855-0.6396638780150.716174896162-0.513014990739-0.8360022806340.483058887957-0.3933306997580.944884912217-0.1735664859560.1596362984880.403149260433-0.2785475174570.762260790715-26.4558700789-4.41675946823-35.4331831514
187.987616115042.54033934644-1.044774045282.58750059119-0.7512632831343.43102129285-0.360170837783-0.0167701065108-2.30474649746-0.08452095881820.430818055177-1.10049122730.2811237184970.7226508958240.1060813564530.6063813508530.03242768882810.1033217772780.624182114432-0.3144296372841.31603736095-11.6045767923-5.64060798238-25.5896358315
191.042155089780.4258520658310.06440756522820.8021528971770.2329090248280.104715030141-0.4640800347010.68037107950.204824520732-0.286089899929-0.0491588703589-0.614799121693-0.3992168798260.08071707560090.2499731672182.90846810019-0.593316617298-0.1123054707430.8528414941930.4548074268860.598700435986-36.615761552912.5614740334-53.5123277017
200.7673354992590.214401217848-1.227716472410.127652508772-0.3132482991591.98507987377-0.4490181286670.8501188466740.272440464177-0.9632166088140.176000353162-0.156637211601-0.28061056712-0.268272440439-0.08021969456022.59236910277-0.164384552283-0.5877250369540.6580146567410.2955131320360.31611694958-46.87330274338.9895928294-53.1317262868
212.30219414393-0.2528307582341.02141826810.815444583516-0.3347486492140.484019076221-0.8960056047390.1051916482170.710199185186-0.9955072448930.3042574198320.0645415161298-1.79260381268-0.09964243569760.3854888761962.329099506850.39296725096-0.628662104032-0.4350158918280.5979905441360.316011683947-46.433749690213.7541385911-42.2217836215
221.72464348676-1.390186280580.6356650417721.20099212113-0.3618024778421.49724830968-1.11495838240.2542421016730.973606964864-0.46027776952-0.0355899122986-0.37972850857-0.904195470522-0.118736841816-0.3605660303012.91564525912-0.444086598759-0.5285250927490.0932297790105-0.5570207644190.0182556874503-42.530435723511.945190423-50.4216961862
231.64327202841-0.516330549120.03758740186142.558367964640.07265320812770.0007434132820270.191401429759-0.01643820413440.6022422772420.220324732466-0.038470054666-0.88475296426-0.9735263493760.8804195416970.4398638521112.48824399482-1.08281437901-0.1379313444240.9220351507740.3717187697381.19648616176-21.501981259115.5346087502-42.9066720852
240.894660482267-0.334357650371.136162178552.240457594550.999381573762.38311139955-0.4461165069860.689300855949-1.51868120256-0.5786717772560.679633660143-0.736165169087-0.08287495910371.45656113082-0.6611543402011.01666832483-0.1664718795250.622647034841.53865794323-0.8281266733011.94120949318-6.2849146461-9.76113475765-36.7524907488
251.77985444985-0.04480390527881.169147242841.39248087369-0.5416229940870.973266476335-0.7254117708422.42220150254-0.666268989061-1.775303697980.395139367029-0.625872524249-0.2327019839410.9672695110940.1124780736351.65552720184-0.9375830648280.6740789023482.22101251836-0.3597373730721.04597481927-12.56436310031.54866244546-45.4949452682
264.70443718273-1.14870521962-3.557217222250.9250272307580.5197159549562.868008740090.1017830457411.72524355835-1.1457334696-0.662921839237-0.328351100244-0.3990071826670.1023390809311.011289482411.00189866471.44445978814-0.3466225451830.6863817615212.52300316528-0.8016779694121.00010194683-11.7591202029-6.27075794974-50.777674119
273.903305542111.63621316749-0.6071644854962.096928876190.7461746187333.66892943857-0.879150704954-0.00220651612501-0.2526550866090.261163347106-0.468235717212-0.13193157126-0.7459097117640.728050858845-0.4997878492081.80516752802-0.9971820353540.1980919817361.524467725010.07000115794450.654994857427-21.900544044110.4046411355-36.8254498799
281.97316154976-0.2810649126931.92703841080.0858740774743-0.3412347534361.921164590680.629887877490.835805722903-0.489249312813-2.1554932311-0.156590409243-1.609143027730.4697210212261.29589522709-0.5536202069291.68420509694-0.2484888389970.6913710788221.84584722682-0.5533556121211.52723908514-5.76860473224-9.02054205224-46.8119301242
292.424382516171.20774326690.2201793393841.609574478240.9255649324862.09176330722-0.3052996901481.15120590262-0.408688131738-0.9223027751840.47558134133-1.666721105630.2962017664271.63168803850.2415144183871.35787927331-0.3629375710820.7055371847222.28671388083-0.1972655130021.52248320133-2.279037768282.33040496833-45.4193111486
309.84742018691-0.838180630579-5.702982113524.90976742488-2.148753486994.67409944388-0.152685451027-0.9177699810452.06049293979-0.8285491466440.2493651540491.630983140821.27283208247-0.68252039756-0.2286888284661.19975751402-0.283511566477-0.2164507838691.47595741565-0.1675866557711.42218832121-68.41323076129.3667137815-86.5829200952
315.56241977006-4.331462247251.734400113764.51096197133-3.853710723446.149635334710.3873123874260.465081972703-1.214012386642.33071807471-1.559297283080.8830122057741.075941552850.09654903194571.414490021034.84312256560.456312398422-0.9647473897082.47872067261-0.855712472392.71387613338-80.3387306471-12.5156070111-77.5359306969
327.09127666421-3.708768563940.8525777396515.75397722546-0.4968706476265.07395744436-1.348539746050.749309345916-0.303284352630.06181939490150.6896682625710.817730168496-0.865082130936-0.5805552906350.2938421012821.440201084510.216533613128-0.1678333840390.8677188457070.04535052225540.936360020305-75.44518467015.02496561134-60.7770675313
333.74041660052-0.648490659243-4.547906451070.1607469884170.6235708828225.50319306656-0.1377996448531.11799625953-0.67753539991-0.06144112218830.102395895809-0.0668602295698-0.0067449672412-1.51895689619-0.2650246540381.327900671420.0216527257832-0.2466542979791.15264388012-0.04115598372330.998462228567-69.79604064189.26946136289-75.4060928801
345.28432072795-2.59039880477-2.593903373672.81535121386-0.1706159623982.73306994118-0.119949127633-0.3601938073820.830221843124-0.0572295356824-0.1309130073530.3327754311311.355897751570.4782503943510.2137647805431.145442640780.123196089305-0.1581030939881.48357532207-0.1235396418390.863429312524-82.8344193215-27.0761468132-26.6124299309
353.760443927820.2574760005094.792057781380.06347216679090.3644324009626.076579122591.63005916333-1.36260349999-2.69280371015-0.0900594208461.08489273995-1.021120294192.53496512402-0.302663238399-2.359397753662.7870847212-0.253719522035-0.4808504734321.47327367369-0.133083525613.08519697354-86.9515568237-49.6850463204-20.3237535822
363.66281951236-0.5534193824923.412472114241.61299302957-3.487459357399.310702402960.935521426659-0.974278917387-1.61106202763-0.5483874474230.887527288576-0.8878520514581.628846170430.474161628703-2.08868754333.52167544753-0.531480168457-0.6027919092722.36244140451-0.4095645350183.35718506151-76.2170555917-47.305549489-13.0348464775
376.424335016074.647329227340.5791567549367.386873283874.71644230124.77560187847-0.148553686213-0.660447590187-1.06223443168-1.71426678268-0.3315195809950.3658311662270.139048192131-0.6476301347280.1053946587612.41884311118-0.2827279784780.298891519311.94337362057-0.202109573032.46415446553-85.2612283861-48.9807178237-31.1422215453
380.01251324627140.2183564491560.1104457968464.706595163973.755504346266.013365013990.287128311641-0.794873786414-0.449413524661-2.4883120712-1.311181147472.3861011473-0.319665097328-2.975668379711.578460669262.24896336791-0.234130849476-0.8161108751763.2101930775-0.5564754835882.06119667176-102.78858072-37.8755322944-21.7619455636
393.128048035081.250789398570.125752167092.593277621464.537155316689.77509269184-0.112424665787-1.48478435674-0.736423839618-0.562187891041-0.8523995584170.2292890679990.523445100917-0.6598163784860.4933938926790.990795018709-0.4813111792220.08571207166022.327403509750.157074143941.16968249049-88.4865848603-36.0641763093-8.26768186497
401.31272553867-0.495363464869-0.7058723354671.260294259860.9189166991510.740691346875-0.3534207784690.684008021239-0.618236277928-1.119907926690.9074352557530.743157220064-0.42831984665-1.41627827968-0.3561126764440.719627537582-0.2135237972-0.2738295849741.755600131530.1346666100190.90954441717-83.7971822909-33.41124136555.09579605097
410.652757611594-0.142562771363-0.2486806066560.6685048022751.636296990934.03219563341.011916628581.372416662440.27555180736-1.03325228845-0.0860810598699-0.64933146159-1.03763577823-1.43006687895-0.4641394205271.749222937470.15131588433-0.3117757274042.91038086809-0.01643317461821.26700253901-90.6893768484-26.1712717022-17.1012988177
423.14853919843-1.11848978284-1.519713374462.254183650860.2756528667982.90473985160.7454449766071.300050167780.225878613859-0.263698402587-0.218845448489-0.631187520753-0.492047837492-1.53680828024-0.7000232189321.290309062560.206617487462-0.02861411412621.90586683442-0.0483344068550.895059931896-74.822500397-27.9459164467-26.9932851585
437.41583670056-0.4844300448270.1633439048912.97460568026-1.543547594154.57094817980.369990462894-0.0548395995023-0.655647419578-0.301162110127-0.1241679320640.3504505754560.645253061479-0.839339922759-0.2922407434590.359181429501-0.116795059218-0.09273867828520.6229134962620.03275313267750.498275128177-62.2646059306-40.602406275222.9892128236
443.72596264705-1.48701387160.6714984874562.89096503354-0.1217185416213.403974468450.06002286188890.988405358517-0.163732241336-0.354332652552-0.030135511233-0.1192845993160.376286241396-0.0949918208636-0.05071898532110.325972049751-0.0529284899328-0.02547568811960.64753942164-0.07695556101220.570042491802-59.7127692614-40.870280574113.9505862548
452.73326149590.286684782721.414188794873.014501949960.3499983159623.63067474523-0.1810709048290.335683536629-0.374721319880.4760339848670.358242211984-0.6322689497550.2618437165260.497084893312-0.2908801323910.2552117273780.201101717246-0.2371120396930.819094778877-0.1283474865560.640051546459-41.7080719878-31.109501224822.7562948777
462.52587525466-1.54879323278-1.782642667453.50662798973-0.7926977075342.88518465369-0.1160766231210.055052845916-0.6525713262491.499836771590.244059093622-0.8865442125250.02876156715650.841177970451-0.05912168807040.5271128652840.0694732991485-0.2641153289091.166341385450.01116426872380.930697816881-28.0679540618-29.864379659431.7097312237
471.0423695559-0.294752319156-0.2937707463352.81910473437-0.3454087920865.08325979505-0.02222694416070.5621843199120.105710831195-0.121686251857-0.1908141090660.0229361575133-0.446170985664-0.06118921789920.1846557366730.2584529934610.0545310681188-0.05425115345980.6962533538160.06669613084540.580575053653-59.1098385239-18.45336850579.84509632254
482.203780586320.594301729122-0.283104417681.03807465076-0.06883152539171.2826198531-0.4104363312610.4068597188970.18448348873-0.3586651219360.109950854468-0.0832426209144-0.3906872522330.4551411343610.1019584990090.358333285443-0.0794511649442-0.1185202369790.8022106563420.04091061249180.57499308227-51.9224744735-18.677868650213.355123603
493.55190138238-0.852248634429-0.0111473216833.494418998360.2065624752651.58787295859-0.5708967167071.31277022882-0.871882417202-0.6368721724520.711733395504-1.03427502371-0.2500823821491.23021593570.06574923738570.470594646125-0.3040620347740.1088023612291.98745742179-0.2124056548941.1728576362-22.4535528145-24.629017625516.7644061533
503.32440893412-2.13471879868-0.9038712583938.708310624350.7508181405771.84700649930.1382467421392.55603728541-0.14479799739-1.20889760139-1.006203741650.7152887949010.409782618914-0.3573168797620.6412914579750.7529037132570.138903202847-0.08186086187621.70876421898-0.09552095024611.01652148082-27.4985110874-14.003240384591.0186468972
514.16419050152-4.573577918440.5836604218765.46126251396-2.146945915335.30353008174-0.6565251648731.3981965168-2.38467547866-1.103642951950.1266484020563.452787573892.16126570187-2.970069343380.3450255417553.24347390856-0.789654995743-1.078020180825.24236775513-1.556941141153.82902083285-10.3301832969-29.44944699586.1764272653
523.008132096441.534082720522.660221362724.390335449670.984132291677.25960488133-0.360657483806-3.01159338320.06439827040141.133532894110.611568441504-1.67917556346-2.37933847537-0.763659571979-0.05136404663331.55617816228-0.1093816358-0.5402302026052.47283300904-0.4942957432981.43507340974-25.5487153877-18.549905156964.2108643784
534.83737727091.61339876602-0.6126712934045.44219749439-2.15963014210.906929458439-1.619762026411.45580703083-0.84735981311-0.6940480809990.00414397188801-0.897902594915-0.7496200509161.009913262461.395608770110.975655018049-0.375842646448-0.2159654144992.633719400730.03348496020641.19551569486-29.573179279-14.286588340287.9175975215
542.84860579426-0.2436833819471.280004754774.223684531192.004583778742.106584970290.0654258321089-0.15121264630.422936622303-0.536569692357-0.452301132343-0.382934770740.0188332304008-0.1188063587820.3489444959810.9895073050370.0600525858293-0.01922665214430.9996289478910.1147658117320.944194147906-46.2795394051-33.579178310855.2615494297
553.22236525343-0.0285461066871-0.9279987170336.959706745971.844015553559.234603919360.1986301141990.229480580434-0.245756509950.6740430467570.5345774417820.3467659128011.22712615065-0.799460674298-0.5127535488340.5463385671420.0848485695193-0.09858754801860.7090424110280.1692430576390.747937699729-77.1747594621-42.853328553842.5729556186
568.192415391020.3128455478761.55226743665.27494323035-1.493723569263.10105317197-0.527537596663-0.02391209339950.6556126843240.235840252877-0.2573479976310.265319711967-0.658276404883-1.035029874430.1767012311441.01908936762-0.0606324615161-0.02827497309920.822333544355-0.1563319887471.12211023924-58.733939517-16.518040797156.9492231122
573.42225037780.9058654871850.142891988241.244311971230.0443714718802-0.05083317607920.02210100870920.05187535748550.8525561885060.727913420413-0.1677506988460.07329382691110.160638928564-0.07140198312040.1868174127071.317038939530.0386310604811-0.02006275221671.08355673742-0.08655775184431.14532034025-59.2069060002-15.066612157253.0319570185
584.44222147946-0.0826088105068-0.997071942086.769795604882.548072715825.88192395469-0.0421185623336-0.434756053145-0.3150690935960.747421875312-0.02250951679750.593151545291-0.198895662672-2.274834006680.1184344603780.744775753380.2343676472980.3033691439281.335775551840.2847656377090.906116535184-84.8826174136-34.936429340651.1328567659
593.08148953491-0.3967753688120.1910732193671.259056064912.223775994845.510196680.480729953553-1.297265791330.167679691891.37710838784-0.4766089115922.349515019850.334794464188-2.687359470120.3914184721511.01431878930.0104074645450.6071776555312.047558693270.3052946802491.80988100401-93.4229733237-38.409807177353.3824631242
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'H' and (resid 3 through 36 )HA3 - 361 - 34
22chain 'H' and (resid 37 through 136 )HA37 - 13635 - 134
33chain 'H' and (resid 137 through 157 )HA137 - 157135 - 155
44chain 'H' and (resid 158 through 187 )HA158 - 187156 - 185
55chain 'H' and (resid 188 through 228 )HA188 - 228186 - 226
66chain 'L' and (resid 1 through 39 )LB1 - 391 - 39
77chain 'L' and (resid 40 through 114 )LB40 - 11440 - 114
88chain 'L' and (resid 115 through 173 )LB115 - 173115 - 173
99chain 'L' and (resid 174 through 215 )LB174 - 215174 - 215
1010chain 'R' and (resid 1 through 15 )RC1 - 15
1111chain 'R' and (resid 16 through 35 )RC16 - 35
1212chain 'R' and (resid 36 through 45 )RC36 - 45
1313chain 'R' and (resid 46 through 60 )RC46 - 60
1414chain 'R' and (resid 61 through 72 )RC61 - 72
1515chain 'A' and (resid 3 through 20 )AD3 - 201 - 18
1616chain 'A' and (resid 21 through 102 )AD21 - 10219 - 100
1717chain 'A' and (resid 103 through 189 )AD103 - 189101 - 187
1818chain 'A' and (resid 190 through 228 )AD190 - 228188 - 226
1919chain 'B' and (resid 1 through 26 )BE1 - 261 - 26
2020chain 'B' and (resid 27 through 39 )BE27 - 3927 - 39
2121chain 'B' and (resid 40 through 62 )BE40 - 6240 - 62
2222chain 'B' and (resid 63 through 103 )BE63 - 10363 - 103
2323chain 'B' and (resid 104 through 114 )BE104 - 114104 - 114
2424chain 'B' and (resid 115 through 129 )BE115 - 129115 - 129
2525chain 'B' and (resid 130 through 151 )BE130 - 151130 - 151
2626chain 'B' and (resid 152 through 164 )BE152 - 164152 - 164
2727chain 'B' and (resid 165 through 175 )BE165 - 175165 - 175
2828chain 'B' and (resid 176 through 198 )BE176 - 198176 - 198
2929chain 'B' and (resid 199 through 215 )BE199 - 215199 - 215
3030chain 'C' and (resid 1 through 10 )CF1 - 10
3131chain 'C' and (resid 11 through 35 )CF11 - 35
3232chain 'C' and (resid 36 through 55 )CF36 - 55
3333chain 'C' and (resid 56 through 72 )CF56 - 72
3434chain 'F' and (resid 1 through 10 )FG1 - 10
3535chain 'F' and (resid 11 through 20 )FG11 - 20
3636chain 'F' and (resid 21 through 25 )FG21 - 25
3737chain 'F' and (resid 26 through 30 )FG26 - 30
3838chain 'F' and (resid 31 through 40 )FG31 - 40
3939chain 'F' and (resid 41 through 45 )FG41 - 45
4040chain 'F' and (resid 46 through 60 )FG46 - 60
4141chain 'F' and (resid 61 through 65 )FG61 - 65
4242chain 'F' and (resid 66 through 72 )FG66 - 72
4343chain 'D' and (resid 3 through 36 )DH3 - 361 - 34
4444chain 'D' and (resid 37 through 102 )DH37 - 10235 - 100
4545chain 'D' and (resid 103 through 157 )DH103 - 157101 - 155
4646chain 'D' and (resid 158 through 228 )DH158 - 228156 - 226
4747chain 'E' and (resid 1 through 76 )EI1 - 761 - 76
4848chain 'E' and (resid 77 through 114 )EI77 - 11477 - 114
4949chain 'E' and (resid 115 through 215 )EI115 - 215115 - 215
5050chain 'O' and (resid 1 through 10 )OJ1 - 10
5151chain 'O' and (resid 11 through 40 )OJ11 - 40
5252chain 'O' and (resid 41 through 60 )OJ41 - 60
5353chain 'O' and (resid 61 through 72 )OJ61 - 72
5454chain 'G' and (resid 3 through 115 )GK3 - 1151 - 113
5555chain 'G' and (resid 116 through 228 )GK116 - 228114 - 226
5656chain 'I' and (resid 1 through 49 )IL1 - 491 - 49
5757chain 'I' and (resid 50 through 114 )IL50 - 11450 - 114
5858chain 'I' and (resid 115 through 175 )IL115 - 175115 - 175
5959chain 'I' and (resid 176 through 215 )IL176 - 215176 - 215

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