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- PDB-9bb3: Backbone Modification in the GA Module of Protein PAB: beta3-resi... -
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Open data
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Basic information
Entry | Database: PDB / ID: 9bb3 | ||||||
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Title | Backbone Modification in the GA Module of Protein PAB: beta3-residues at positions 22 and 26 | ||||||
![]() | Peptostreptococcal albumin-binding protein | ||||||
![]() | PROTEIN BINDING / helix bundle / designed variant | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Lin, Y. / Horne, W.S. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Backbone Modification in a Protein Hydrophobic Core. Authors: Lin, Y. / Horne, W.S. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 169.2 KB | Display | ![]() |
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PDB format | ![]() | 141.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 443 KB | Display | ![]() |
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Full document | ![]() | 528.5 KB | Display | |
Data in XML | ![]() | 19.4 KB | Display | |
Data in CIF | ![]() | 25 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 9bb1C ![]() 9bb2C ![]() 9bb4C ![]() 9bb5C ![]() 9bb6C ![]() 9bb7C C: citing same article ( |
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Similar structure data | Similarity search - Function & homology ![]() |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 5209.001 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) ![]() |
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Has ligand of interest | Y |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Type: solution Contents: 1 mM GA Module of Protein PAB: beta3 residues at positions 22 and 26, 0.2 mM DSS, 90% H2O/10% D2O Label: sample_1 / Solvent system: 90% H2O/10% D2O | ||||||||||||
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Sample |
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Sample conditions | Ionic strength: 1 mM / Label: conditions_1 / pH: 6 pH* / Pressure: 1 atm / Temperature: 300 K |
-NMR measurement
NMR spectrometer | Type: Bruker AVANCE / Manufacturer: Bruker / Model: AVANCE / Field strength: 700 MHz |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 3 | |||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 10 |