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Open data
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Basic information
Entry | Database: PDB / ID: 8z3b | ||||||
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Title | Crystal structure of GSTd2 | ||||||
![]() | Glutathione S-transferase delta | ||||||
![]() | TRANSFERASE / Plutella xylostella / Glutathione S-transferase / Molecular cloning / Insecticide resistance | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Mo, X. / Yao, Y. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Characterization of a Plutella xylostella GZTd2, evolved in isothiocyanate detoxification Authors: Mo, X. / Yao, Y. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 99.1 KB | Display | ![]() |
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PDB format | ![]() | 75.4 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 427.1 KB | Display | ![]() |
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Full document | ![]() | 427.5 KB | Display | |
Data in XML | ![]() | 18.7 KB | Display | |
Data in CIF | ![]() | 27.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | Similarity search - Function & homology ![]() |
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Links
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Assembly
Deposited unit | ![]()
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2 | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 23559.840 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() #2: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.71 Å3/Da / Density % sol: 58 % |
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Crystal grow | Temperature: 293 K / Method: vapor diffusion / Details: 15% PEG3350, and 0.12M Tris at a pH of 7.0 |
-Data collection
Diffraction | Mean temperature: 100 K / Serial crystal experiment: N |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MAR CCD 165 mm / Detector: CCD / Date: Jan 1, 2020 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1 Å / Relative weight: 1 |
Reflection | Resolution: 2.3→25.355 Å / Num. obs: 23353 / % possible obs: 99.77 % / Redundancy: 7.2 % / CC1/2: 0.84 / Net I/σ(I): 8.8 |
Reflection shell | Resolution: 2.3→2.38 Å / Num. unique obs: 2288 / CC1/2: 0.87 |
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Processing
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Refinement | Method to determine structure: ![]() Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
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Displacement parameters | Biso mean: 31.35 Å2 | ||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.3→25.355 Å
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Refine LS restraints |
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