A: Major capsid protein B: Major capsid protein C: Major capsid protein D: Major capsid protein E: Major capsid protein F: Major capsid protein G: Major capsid protein 3: gp_16 (Minor Capsid Protein) 2: gp_16 (Minor Capsid Protein) 1: gp_16 (Minor Capsid Protein) Y: HNH endonuclease Z: HNH endonuclease 6: gp_16 (Minor Capsid Protein) 5: gp_16 (Minor Capsid Protein) 4: gp_16 (Minor Capsid Protein) 7: gp_16 (Minor Capsid Protein)
A: Major capsid protein B: Major capsid protein C: Major capsid protein D: Major capsid protein E: Major capsid protein F: Major capsid protein G: Major capsid protein 3: gp_16 (Minor Capsid Protein) 2: gp_16 (Minor Capsid Protein) 1: gp_16 (Minor Capsid Protein) Y: HNH endonuclease Z: HNH endonuclease 6: gp_16 (Minor Capsid Protein) 5: gp_16 (Minor Capsid Protein) 4: gp_16 (Minor Capsid Protein) 7: gp_16 (Minor Capsid Protein)
A: Major capsid protein B: Major capsid protein C: Major capsid protein D: Major capsid protein E: Major capsid protein F: Major capsid protein G: Major capsid protein 3: gp_16 (Minor Capsid Protein) 2: gp_16 (Minor Capsid Protein) 1: gp_16 (Minor Capsid Protein) Y: HNH endonuclease Z: HNH endonuclease 6: gp_16 (Minor Capsid Protein) 5: gp_16 (Minor Capsid Protein) 4: gp_16 (Minor Capsid Protein) 7: gp_16 (Minor Capsid Protein)
x 5
icosahedral pentamer
2.14 MDa, 80 ポリマー
分子量 (理論値)
分子数
合計 (水以外)
2,137,201
80
ポリマ-
2,137,201
80
非ポリマー
0
0
水
0
タイプ
名称
対称操作
数
identity operation
1_555
x,y,z
1
point symmetry operation
4
4
A: Major capsid protein B: Major capsid protein C: Major capsid protein D: Major capsid protein E: Major capsid protein F: Major capsid protein G: Major capsid protein 3: gp_16 (Minor Capsid Protein) 2: gp_16 (Minor Capsid Protein) 1: gp_16 (Minor Capsid Protein) Y: HNH endonuclease Z: HNH endonuclease 6: gp_16 (Minor Capsid Protein) 5: gp_16 (Minor Capsid Protein) 4: gp_16 (Minor Capsid Protein) 7: gp_16 (Minor Capsid Protein)
詳細: Standard CTF correction inside RELION's reconstruction. タイプ: PHASE FLIPPING AND AMPLITUDE CORRECTION
対称性
点対称性: I (正20面体型対称)
3次元再構成
解像度: 2.66 Å / 解像度の算出法: FSC 0.143 CUT-OFF / 粒子像の数: 44239 / 対称性のタイプ: POINT
原子モデル構築
プロトコル: AB INITIO MODEL 詳細: Amino acid sequence built into the map for a single major capsid protein and refined with Phenix. Model then used for rest of asymmetric unit and refined with Phenix. Final step involved using Isolde.