+データを開く
-基本情報
登録情報 | データベース: PDB / ID: 8pqe | |||||||||||||||
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タイトル | c-KIT kinase domain in complex with avapritinib derivative 11 | |||||||||||||||
要素 | Mast/stem cell growth factor receptor Kit | |||||||||||||||
キーワード | TRANSFERASE (転移酵素) / c-KIT protein kinase / avapritinib / inhibitor (酵素阻害剤) / tyrosine kinase (プロテインチロシンキナーゼ) / transmembrane receptor (細胞表面受容体) / stem cell factor / SCF / stem cell factor receptor (KIT (タンパク質)) / GIST / gastrointestinal stromal tumors / P10721 | |||||||||||||||
機能・相同性 | 機能・相同性情報 Dasatinib-resistant KIT mutants / Imatinib-resistant KIT mutants / KIT mutants bind TKIs / Masitinib-resistant KIT mutants / Nilotinib-resistant KIT mutants / Regorafenib-resistant KIT mutants / Signaling by kinase domain mutants of KIT / Sunitinib-resistant KIT mutants / Signaling by juxtamembrane domain KIT mutants / Sorafenib-resistant KIT mutants ...Dasatinib-resistant KIT mutants / Imatinib-resistant KIT mutants / KIT mutants bind TKIs / Masitinib-resistant KIT mutants / Nilotinib-resistant KIT mutants / Regorafenib-resistant KIT mutants / Signaling by kinase domain mutants of KIT / Sunitinib-resistant KIT mutants / Signaling by juxtamembrane domain KIT mutants / Sorafenib-resistant KIT mutants / Signaling by extracellular domain mutants of KIT / stem cell factor receptor activity / hematopoietic stem cell migration / melanocyte adhesion / positive regulation of pyloric antrum smooth muscle contraction / positive regulation of colon smooth muscle contraction / erythropoietin-mediated signaling pathway / positive regulation of vascular associated smooth muscle cell differentiation / melanocyte migration / positive regulation of dendritic cell cytokine production / Kit signaling pathway / regulation of bile acid metabolic process / positive regulation of small intestine smooth muscle contraction / mast cell differentiation / positive regulation of mast cell proliferation / mast cell chemotaxis / Fc receptor signaling pathway / glycosphingolipid metabolic process / mast cell proliferation / positive regulation of long-term neuronal synaptic plasticity / detection of mechanical stimulus involved in sensory perception of sound / positive regulation of pseudopodium assembly / positive regulation of mast cell cytokine production / immature B cell differentiation / melanocyte differentiation / germ cell migration / lymphoid progenitor cell differentiation / myeloid progenitor cell differentiation / digestive tract development / negative regulation of programmed cell death / embryonic hemopoiesis / lamellipodium assembly / 顔料 / tongue development / megakaryocyte development / Regulation of KIT signaling / mast cell degranulation / stem cell population maintenance / positive regulation of Notch signaling pathway / cytokine binding / negative regulation of reproductive process / negative regulation of developmental process / spermatid development / growth factor binding / somatic stem cell population maintenance / 造血 / T cell differentiation / ectopic germ cell programmed cell death / hematopoietic progenitor cell differentiation / : / response to cadmium ion / ovarian follicle development / positive regulation of tyrosine phosphorylation of STAT protein / TFAP2 (AP-2) family regulates transcription of growth factors and their receptors / transmembrane receptor protein tyrosine kinase activity / SH2 domain binding / cell chemotaxis / 赤血球形成 / B cell differentiation / acrosomal vesicle / Signaling by phosphorylated juxtamembrane, extracellular and kinase domain KIT mutants / epithelial cell proliferation / 細胞分化 / positive regulation of receptor signaling pathway via JAK-STAT / visual learning / Signaling by SCF-KIT / cytoplasmic side of plasma membrane / 受容体型チロシンキナーゼ / 核小体 / positive regulation of DNA-binding transcription factor activity / cytokine-mediated signaling pathway / male gonad development / Constitutive Signaling by Aberrant PI3K in Cancer / cell-cell junction / PIP3 activates AKT signaling / regulation of cell population proliferation / regulation of cell shape / PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling / actin cytoskeleton organization / RAF/MAP kinase cascade / 精子形成 / protein tyrosine kinase activity / protease binding / positive regulation of MAPK cascade / protein autophosphorylation / positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction / receptor complex / positive regulation of cell migration / intracellular signal transduction / 炎症 類似検索 - 分子機能 | |||||||||||||||
生物種 | Homo sapiens (ヒト) | |||||||||||||||
手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2 Å | |||||||||||||||
データ登録者 | Teuber, A. / Niggenaber, J. / Mueller, M.P. / Rauh, D. | |||||||||||||||
資金援助 | European Union, ドイツ, 4件
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引用 | ジャーナル: Nat Commun / 年: 2024 タイトル: Avapritinib-based SAR studies unveil a binding pocket in KIT and PDGFRA. 著者: Teuber, A. / Schulz, T. / Fletcher, B.S. / Gontla, R. / Muhlenberg, T. / Zischinsky, M.L. / Niggenaber, J. / Weisner, J. / Kleinbolting, S.B. / Lategahn, J. / Sievers, S. / Muller, M.P. / Bauer, S. / Rauh, D. | |||||||||||||||
履歴 |
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-構造の表示
構造ビューア | 分子: MolmilJmol/JSmol |
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-ダウンロードとリンク
-ダウンロード
PDBx/mmCIF形式 | 8pqe.cif.gz | 289.3 KB | 表示 | PDBx/mmCIF形式 |
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PDB形式 | pdb8pqe.ent.gz | 193.1 KB | 表示 | PDB形式 |
PDBx/mmJSON形式 | 8pqe.json.gz | ツリー表示 | PDBx/mmJSON形式 | |
その他 | その他のダウンロード |
-検証レポート
アーカイブディレクトリ | https://data.pdbj.org/pub/pdb/validation_reports/pq/8pqe ftp://data.pdbj.org/pub/pdb/validation_reports/pq/8pqe | HTTPS FTP |
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-関連構造データ
関連構造データ | 8pq9C 8pqaC 8pqbC 8pqcC 8pqdC 8pqfC 8pqgC 8pqhC 8pqiC 8pqjC 8pqkC C: 同じ文献を引用 (文献) |
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類似構造データ | 類似検索 - 機能・相同性F&H 検索 |
実験データセット #1 | データの種類: diffraction image data / 詳細: https://www.proteindiffraction.org/project/8PQE/ |
-リンク
-集合体
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非結晶学的対称性 (NCS) | NCSドメイン:
NCSドメイン領域:
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