+Open data
-Basic information
Entry | Database: PDB / ID: 8pkc | ||||||
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Title | Structure of Api m1 in complex with the AM1-4 nanobody | ||||||
Components |
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Keywords | ALLERGEN / antibody / nanobody | ||||||
Function / homology | Function and homology information calcium-dependent phospholipase A2 activity / phospholipase A2 / arachidonic acid secretion / phospholipid metabolic process / lipid catabolic process / calcium ion binding / extracellular region Similarity search - Function | ||||||
Biological species | Lama glama (llama) Apis mellifera (honey bee) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 4.1 Å | ||||||
Authors | Aagaard, J.B. / Gandini, R. / Spillner, E. / Miehe, M. | ||||||
Funding support | Denmark, 1items
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Citation | Journal: To be published Title: Nanobody-based IgG formats as blocking antibodies of the major honeybee venom allergen Api m 1 Authors: Aagaard, J.B. #1: Journal: Acta Crystallogr D Biol Crystallogr / Year: 2012 Title: Towards automated crystallographic structure refinement with phenix.refine. Authors: Afonine, P.V. / Grosse-Kunstleve, R.W. / Echols, N. / Headd, J.J. / Moriarty, N.W. / Mustyakimov, M. / Terwilliger, T.C. / Urzhumtsev, A. / Zwart, P.H. / Adams, P.D. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 8pkc.cif.gz | 316.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb8pkc.ent.gz | 252.2 KB | Display | PDB format |
PDBx/mmJSON format | 8pkc.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/pk/8pkc ftp://data.pdbj.org/pub/pdb/validation_reports/pk/8pkc | HTTPS FTP |
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-Related structure data
Related structure data | 8pihC C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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1 |
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2 |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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