Entry Database : PDB / ID : 8j8t Structure visualization Downloads & linksTitle Crystal structure of calcium-saturated SRCR domain 11 of DMBT1 ComponentsDeleted in malignant brain tumors 1 protein Details Keywords METAL BINDING PROTEIN / Calcium-binding / scavenger receptor / SRCR domain / SALSA / DMBT1Function / homology Function and homology informationFunction Domain/homology Component
induction of bacterial agglutination / zymogen granule membrane / scavenger receptor activity / Surfactant metabolism / zymogen binding / pattern recognition receptor activity / epithelial cell differentiation / extracellular matrix / defense response / phagocytic vesicle membrane ... induction of bacterial agglutination / zymogen granule membrane / scavenger receptor activity / Surfactant metabolism / zymogen binding / pattern recognition receptor activity / epithelial cell differentiation / extracellular matrix / defense response / phagocytic vesicle membrane / calcium-dependent protein binding / protein transport / defense response to virus / defense response to Gram-negative bacterium / defense response to Gram-positive bacterium / innate immune response / extracellular space / extracellular exosome / extracellular region / cytoplasm Similarity search - Function SRCR domain signature. / Scavenger receptor cysteine-rich domain / Zona pellucida domain, conserved site / Zona pellucida, ZP-C domain / ZP domain signature. / Zona pellucida-like domain / Zona pellucida (ZP) domain / ZP domain profile. / Zona pellucida domain / SRCR domain ... SRCR domain signature. / Scavenger receptor cysteine-rich domain / Zona pellucida domain, conserved site / Zona pellucida, ZP-C domain / ZP domain signature. / Zona pellucida-like domain / Zona pellucida (ZP) domain / ZP domain profile. / Zona pellucida domain / SRCR domain / SRCR domain profile. / SRCR-like domain / SRCR-like domain superfamily / Scavenger receptor Cys-rich / CUB domain / Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. / CUB domain / CUB domain profile. / Spermadhesin, CUB domain superfamily Similarity search - Domain/homologyBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.81 Å DetailsAuthors Zhang, C. / Lu, P. / Nagata, K. Funding support Japan, 3items Details Hide detailsOrganization Grant number Country Japan Society for the Promotion of Science (JSPS) JP18H02151 Japan Japan Society for the Promotion of Science (JSPS) JP19H05771 Japan Japan Society for the Promotion of Science (JSPS) JP19H03045 Japan
CitationJournal : To Be Published Title : Crystal structure of Calcium-saturated SRCR domain 11 of SALSAAuthors : Zhang, C. / Lu, P. / Nagata, K. History Deposition May 2, 2023 Deposition site : PDBJ / Processing site : PDBJRevision 1.0 Dec 13, 2023 Provider : repository / Type : Initial release