- PDB-8i40: Crystal structure of ASCT from Trypanosoma brucei in complex with CoA. -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 8i40
Title
Crystal structure of ASCT from Trypanosoma brucei in complex with CoA.
Components
Succinyl-CoA:3-ketoacid-coenzyme A transferase
Keywords
ELECTRON TRANSPORT / Trypanosoma brucei / Acetate:succinate CoA transferase
Function / homology
Function and homology information
3-oxoacid CoA-transferase / cellular ketone body metabolic process / succinyl-CoA:3-oxo-acid CoA-transferase activity / CoA-transferase activity / ketone body catabolic process / mitochondrion / metal ion binding / cytoplasm Similarity search - Function
Coenzyme A transferase active site / 3-oxoacid CoA-transferase, subunit B / 3-oxoacid CoA-transferase / Coenzyme A transferases signature 2. / Coenzyme A transferase binding site / Coenzyme A transferases signature 1. / Coenzyme A transferase family I / Coenzyme A transferase / Coenzyme A transferase / NagB/RpiA transferase-like Similarity search - Domain/homology
A: Succinyl-CoA:3-ketoacid-coenzyme A transferase B: Succinyl-CoA:3-ketoacid-coenzyme A transferase C: Succinyl-CoA:3-ketoacid-coenzyme A transferase D: Succinyl-CoA:3-ketoacid-coenzyme A transferase hetero molecules
Method to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.79→19.9 Å / Cor.coef. Fo:Fc: 0.906 / Cor.coef. Fo:Fc free: 0.841 / SU B: 19.787 / SU ML: 0.384 / Cross valid method: THROUGHOUT / ESU R Free: 0.458 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.28406
2242
4.8 %
RANDOM
Rwork
0.2234
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obs
0.22632
44447
98.49 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK