Entry | Database: PDB / ID: 8h4z |
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Title | Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group P21212 |
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Components | Saccharopine dehydrogenase |
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Keywords | BIOSYNTHETIC PROTEIN / carboxyspermidine dehydrogenase |
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Function / homology | Saccharopine dehydrogenase, NADP binding domain / Saccharopine dehydrogenase-like, C-terminal / Saccharopine dehydrogenase NADP binding domain / Saccharopine dehydrogenase C-terminal domain / NAD(P)-binding domain superfamily / Saccharopine dehydrogenase Function and homology information |
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Biological species | Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.2 Å |
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Authors | Ko, K.Y. / Park, S.C. / Cho, S.Y. / Yoon, S.I. |
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Funding support | Korea, Republic Of, 1items Organization | Grant number | Country |
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National Research Foundation (NRF, Korea) | 2019R1A2C1002100 | Korea, Republic Of |
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Citation | Journal: Biochem.Biophys.Res.Commun. / Year: 2022 Title: Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori. Authors: Ko, K.Y. / Park, S.C. / Cho, S.Y. / Yoon, S.I. |
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History | Deposition | Oct 11, 2022 | Deposition site: PDBJ / Processing site: RCSB |
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Revision 1.0 | Nov 9, 2022 | Provider: repository / Type: Initial release |
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Revision 1.1 | Jun 14, 2023 | Group: Database references / Refinement description ...Database references / Refinement description / Source and taxonomy / Structure summary Category: entity / entity_src_gen ...entity / entity_src_gen / struct_ncs_dom_lim / struct_ref / struct_ref_seq / struct_ref_seq_dif Item: _entity.pdbx_description / _entity_src_gen.gene_src_strain ..._entity.pdbx_description / _entity_src_gen.gene_src_strain / _entity_src_gen.pdbx_gene_src_gene / _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id / _entity_src_gen.pdbx_gene_src_scientific_name / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id / _struct_ref.db_code / _struct_ref.pdbx_db_accession / _struct_ref.pdbx_seq_one_letter_code / _struct_ref_seq.pdbx_db_accession |
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Revision 1.2 | Apr 3, 2024 | Group: Data collection / Refinement description Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model |
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