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万見

- PDB-8gpu: YFV_E_YD6Fab_prefusion -

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データを開く

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基本情報

登録情報

データベース: PDB / ID: 8gpu

タイトル

YFV_E_YD6Fab_prefusion

要素

Envelope protein
YD6Fab_H
YD6Fab_L

キーワード

ANTIVIRAL PROTEIN / Yellow fever virus / neutralizing antibody / human antibody

機能・相同性

機能・相同性情報

helicase activity / protein dimerization activity / host cell endoplasmic reticulum membrane / symbiont entry into host cell / fusion of virus membrane with host endosome membrane / viral envelope / virion attachment to host cell / host cell nucleus / virion membrane / membrane
類似検索 - 分子機能

生物種

Yellow fever virus (黄熱ウイルス)

Homo sapiens (ヒト)

手法

X線回折 /

シンクロトロン /

分子置換 / 解像度: 2.79 Å

データ登録者

Li, Y. / Wu, L. / Qi, J. / Yan, J. / Gao, G.F.

資金援助

中国, 1件

引用

ジャーナル: Innovation (N Y) / 年: 2022
タイトル: A neutralizing-protective supersite of human monoclonal antibodies for yellow fever virus.
著者: Li, Y. / Chen, Z. / Wu, L. / Dai, L. / Qi, J. / Chai, Y. / Li, S. / Wang, Q. / Tong, Z. / Ma, S. / Duan, X. / Ren, S. / Song, R. / Liang, M. / Liu, W. / Yan, J. / Gao, G.F.

履歴

登録	2022年8月27日	登録サイト: PDBJ / 処理サイト: PDBJ
改定 1.0	2022年11月2日	Provider: repository / タイプ: Initial release
改定 1.1	2023年11月29日	Group: Data collection / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model
改定 1.2	2024年10月16日	Group: Structure summary カテゴリ: pdbx_entry_details / pdbx_modification_feature

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構造の表示

構造ビューア	分子: MolmilJmol/JSmol

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ダウンロードとリンク

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ダウンロード

PDBx/mmCIF形式	8gpu.cif.gz	2 MB	表示	PDBx/mmCIF形式
PDB形式	pdb8gpu.ent.gz		表示	PDB形式
PDBx/mmJSON形式	8gpu.json.gz		ツリー表示	PDBx/mmJSON形式
その他	その他のダウンロード

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検証レポート

アーカイブディレクトリ	https://data.pdbj.org/pub/pdb/validation_reports/gp/8gpu ftp://data.pdbj.org/pub/pdb/validation_reports/gp/8gpu	HTTPS FTP

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関連構造データ

関連構造データ	8gptC 8gpxC 5jhlS S: 精密化の開始モデル C: 同じ文献を引用 (文献)
類似構造データ	類似検索 - 機能・相同性F&H 検索類似検索 - 機能F&H 検索類似検索 - 相同性F&H 検索

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リンク

PDBのページ	PDBj / wwPDB / NCBI
「今月の分子」の関連する項目	#170 - 2014年2月広域中和抗体 (Broadly Neutralizing Antibodies) 類似性 (1) #21 - 2001年9月抗体 (Antibodies) 類似性 (1) #256 - 2021年4月 SARSコロナウイルス2型のスパイクと抗体 (SARS-CoV-2 Spike and Antibodies) 類似性 (1) #103 - 2008年7月デングウイルス (Dengue Virus) 類似性 (11) #197 - 2016年5月ジカウイルス (Zika Virus) 類似性 (11)

PDBのページ

PDBj /

wwPDB /

NCBI

「今月の分子」の関連する項目

#170 - 2014年2月
広域中和抗体 (Broadly Neutralizing Antibodies)
類似性 (1)
#21 - 2001年9月
抗体 (Antibodies)
類似性 (1)
#256 - 2021年4月
SARSコロナウイルス2型のスパイクと抗体 (SARS-CoV-2 Spike and Antibodies)
類似性 (1)
#103 - 2008年7月
デングウイルス (Dengue Virus)
類似性 (11)
#197 - 2016年5月
ジカウイルス (Zika Virus)
類似性 (11)

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集合体

登録構造単位

A: Envelope protein

H: YD6Fab_H

L: YD6Fab_L

E: Envelope protein

F: YD6Fab_H

G: YD6Fab_L

B: Envelope protein

C: YD6Fab_H

D: YD6Fab_L

I: Envelope protein

J: YD6Fab_H

K: YD6Fab_L

M: Envelope protein

N: YD6Fab_H

O: YD6Fab_L

P: Envelope protein

Q: YD6Fab_H

R: YD6Fab_L

537 kDa, 18 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

登録構造と同一
登録者が定義した集合体

単位格子

Length a, b, c (Å)	157.259, 278.003, 354.657
Angle α, β, γ (deg.)	90.000, 90.000, 90.000
Int Tables number	20
Space group name H-M	C222₁
Space group name Hall	C2c2
Symmetry operation	#1: x,y,z #2: x,-y,-z #3: -x,y,-z+1/2 #4: -x,-y,z+1/2 #5: x+1/2,y+1/2,z #6: x+1/2,-y+1/2,-z #7: -x+1/2,y+1/2,-z+1/2 #8: -x+1/2,-y+1/2,z+1/2

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要素

#1: タンパク質	Envelope protein 分子量: 43249.832 Da / 分子数: 6 / 由来タイプ: 組換発現由来: (組換発現) Yellow fever virus (黄熱ウイルス) 発現宿主: Escherichia coli BL21(DE3) (大腸菌) / 参照: UniProt: Q89292
#2: 抗体	YD6Fab_H 分子量: 23216.076 Da / 分子数: 6 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 発現宿主: Homo sapiens (ヒト)
#3: 抗体	YD6Fab_L 分子量: 23078.516 Da / 分子数: 6 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 発現宿主: Homo sapiens (ヒト)
Has protein modification	Y

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実験情報

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実験

実験	手法: X線回折 / 使用した結晶の数: 1

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試料調製

結晶	マシュー密度: 3.61 Å³/Da / 溶媒含有率: 65.97 %
結晶化	温度: 289.5 K / 手法: 蒸気拡散法, シッティングドロップ法詳細: 1% (w/v) tryptone, 0.05 M Na-HEPES, pH 7.0, and 12% (w/v) PEG 3,350

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データ収集

回折	平均測定温度: 100 K / Serial crystal experiment: N
放射光源	由来: シンクロトロン / サイト: SSRF / ビームライン: BL17U1 / 波長: 0.979 Å
検出器	タイプ: DECTRIS EIGER X 16M / 検出器: PIXEL / 日付: 2017年5月18日
放射	プロトコル: SINGLE WAVELENGTH / 単色(M)・ラウエ(L): M / 散乱光タイプ: x-ray
放射波長	波長: 0.979 Å / 相対比: 1
反射	解像度: 2.79→50 Å / Num. obs: 191067 / % possible obs: 99.6 % / 冗長度: 7 % / B_iso Wilson estimate: 49.92 Å² / R_merge(I) obs: 0.184 / Net I/σ(I): 10.7
反射シェル	解像度: 2.8→2.9 Å / Num. unique obs: 18252 / R_rim(I) all: 0.888 / % possible all: 95.9

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解析

ソフトウェア

名称	バージョン	分類
PHENIX	1.19_4092	精密化
HKL-2000		データ削減
HKL-2000		データスケーリング
PHASER		位相決定

精密化

構造決定の手法:

分子置換
開始モデル: 5JHL

5jhl

解像度: 2.79→42.57 Å / SU ML: 0.3771 / 交差検証法: FREE R-VALUE / σ(F): 1.35 / 位相誤差: 30.4464
立体化学のターゲット値: GeoStd + Monomer Library + CDL v1.2

	R_factor	反射数	%反射
R_free	0.2785	8336	5.11 %
R_work	0.2439	154648	-
obs	0.2457	162984	85.37 %

溶媒の処理

減衰半径: 0.9 Å / VDWプローブ半径: 1.11 Å / 溶媒モデル: FLAT BULK SOLVENT MODEL

原子変位パラメータ

B_iso mean: 70.72 Å²

精密化ステップ

サイクル: LAST / 解像度: 2.79→42.57 Å

	タンパク質	核酸	リガンド	溶媒	全体
原子数	37115	0	0	0	37115

拘束条件

Refine-ID	タイプ	Dev ideal	数
X-RAY DIFFRACTION	f_bond_d	0.0041	37965
X-RAY DIFFRACTION	f_angle_d	0.78	51642
X-RAY DIFFRACTION	f_chiral_restr	0.0508	5865
X-RAY DIFFRACTION	f_plane_restr	0.0058	6601
X-RAY DIFFRACTION	f_dihedral_angle_d	15.5109	13514

LS精密化シェル

解像度 (Å)	R_factor R_free	Num. reflection R_free	R_factor R_work	Num. reflection R_work	Refine-ID	% reflection obs (%)
2.79-2.83	0.3678	61	0.3591	1045	X-RAY DIFFRACTION	17.68
2.83-2.86	0.3414	91	0.3454	1763	X-RAY DIFFRACTION	29.03
2.86-2.89	0.3537	108	0.3512	2142	X-RAY DIFFRACTION	35.8
2.89-2.93	0.3739	138	0.332	2677	X-RAY DIFFRACTION	44.74
2.93-2.97	0.3365	204	0.3356	3229	X-RAY DIFFRACTION	54.2
2.97-3.01	0.3742	214	0.3339	3700	X-RAY DIFFRACTION	61.83
3.01-3.05	0.3693	215	0.3238	4086	X-RAY DIFFRACTION	68.4
3.05-3.1	0.395	253	0.3259	4471	X-RAY DIFFRACTION	75.25
3.1-3.15	0.339	284	0.3298	5067	X-RAY DIFFRACTION	83.96
3.15-3.2	0.3559	304	0.3309	5513	X-RAY DIFFRACTION	91.85
3.2-3.25	0.3705	332	0.3178	5800	X-RAY DIFFRACTION	96.98
3.25-3.31	0.3762	315	0.3164	5970	X-RAY DIFFRACTION	99.29
3.31-3.38	0.3384	374	0.2965	5908	X-RAY DIFFRACTION	99.73
3.38-3.45	0.3288	316	0.2822	6029	X-RAY DIFFRACTION	99.91
3.45-3.52	0.3132	313	0.2732	6004	X-RAY DIFFRACTION	100
3.52-3.6	0.3272	323	0.2755	6045	X-RAY DIFFRACTION	100
3.6-3.69	0.3118	320	0.2766	6014	X-RAY DIFFRACTION	100
3.69-3.79	0.2885	324	0.2534	6039	X-RAY DIFFRACTION	99.98
3.79-3.9	0.2824	328	0.2449	6013	X-RAY DIFFRACTION	99.97
3.9-4.03	0.2523	332	0.235	6039	X-RAY DIFFRACTION	99.97
4.03-4.17	0.2637	317	0.2232	6019	X-RAY DIFFRACTION	100
4.17-4.34	0.2293	333	0.2063	6048	X-RAY DIFFRACTION	100
4.34-4.54	0.2048	311	0.1896	6034	X-RAY DIFFRACTION	99.95
4.54-4.78	0.2182	330	0.1862	6072	X-RAY DIFFRACTION	99.97
4.78-5.08	0.2186	334	0.1862	6059	X-RAY DIFFRACTION	99.97
5.08-5.47	0.2309	302	0.2057	6118	X-RAY DIFFRACTION	100
5.47-6.02	0.2667	321	0.2131	6082	X-RAY DIFFRACTION	100
6.02-6.88	0.2679	323	0.2396	6142	X-RAY DIFFRACTION	100
6.88-8.66	0.2437	340	0.2222	6154	X-RAY DIFFRACTION	99.89
8.66-42.57	0.2517	276	0.2154	6366	X-RAY DIFFRACTION	99.24

精密化 TLS

手法: refined / Refine-ID: X-RAY DIFFRACTION

ID	L11 (°²)	L12 (°²)	L13 (°²)	L22 (°²)	L23 (°²)	L33 (°²)	S11 (Å °)	S12 (Å °)	S13 (Å °)	S21 (Å °)	S22 (Å °)	S23 (Å °)	S31 (Å °)	S32 (Å °)	S33 (Å °)	T11 (Å²)	T12 (Å²)	T13 (Å²)	T22 (Å²)	T23 (Å²)	T33 (Å²)	Origin x (Å)	Origin y (Å)	Origin z (Å)
1	2.40880030345	-0.755813587054	-1.07537411753	3.049641561	0.00766990963112	1.42945247861	-0.0351785205768	0.227622216385	-0.191098840342	-0.372964323282	-0.166352964026	0.552201327716	0.0200136446544	-0.268078624943	0.0203782252066	0.229481073693	0.0384858509279	-9.59446473816E-5	0.481464372213	-0.00784258554255	0.415718291447	-40.864904617	-81.6350709208	-0.29572913809
2	0.377307001935	-0.13872991169	0.126735617252	0.0344986597003	0.0433945956349	1.39961175305	-0.0331382387506	0.0256125104848	0.0315747027985	-0.0318714591364	-0.0422096833087	-0.0425031385971	0.0274417356645	-0.228752521939	0.0380205215939	0.231012101329	0.145942961018	0.0358582271994	0.256789434074	-0.0167964455419	0.277320432335	-31.5957169754	-70.6009424181	34.8190132892
3	0.357892964318	-0.0938731146278	1.20328421655	0.0386063497154	-0.236408019289	4.33505306582	0.262948280904	0.226603965754	0.055766757301	-0.145847559052	-0.141804125786	-0.0615537304442	0.138595822792	-0.37585370628	-0.100957834013	0.401797720004	0.097538548497	-0.0294975086419	0.472229888313	-0.0168756536692	0.380598236488	-39.5189247866	-71.3104455997	13.0705229773
4	0.58447845464	0.329513631305	0.0652492590261	0.887833217571	0.711426781368	2.16455348876	0.0187623026478	-0.0655670300769	-0.0895259987985	0.0931642055342	-0.0861555871507	0.122392516429	0.0428019446458	-0.344331190702	0.0602864396482	0.32296004294	0.0694786797795	0.0699534081508	0.254933457018	-0.0509563535628	0.257702874899	-32.1950137462	-73.8040178846	48.8009904781
5	0.689658876847	-0.0402547681296	0.771495789851	0.215419456811	-0.339920921661	2.91389346725	-0.093531327057	0.280123732578	0.0236579920728	-0.0461114880268	-0.119869434834	0.162097962253	-0.141088717063	-0.151268353273	0.0825399006675	0.359278064144	0.284149374467	0.00522953982777	0.362354706042	-0.0722427599261	0.286211994712	-33.4972157	-74.5902687917	18.7729040617
6	1.42154403061	-0.139038730588	-0.0981011284729	1.34474343713	0.0121395794628	1.58246357326	0.144486470437	0.514844424641	-0.00963535371947	-0.175757499413	-0.108668927919	0.16270664884	0.00203410420029	-0.366731042621	-0.0327627239016	0.307830561614	0.100165027078	0.043742342896	0.423349797727	-0.0395191250202	0.215200943112	-27.1652914615	-86.9018486915	-17.2366374754
7	1.01943945269	0.00768237400966	-0.0574520847326	0.32968486205	0.109863051104	0.177509337924	-0.0325623204252	-0.224876347942	0.236888712084	0.262901114883	-0.190727968101	-0.300589481016	-0.192225615747	0.259362077523	0.152728733731	0.463341039701	-0.0193009155936	-0.184823086886	0.625310133472	0.0151485072038	0.489047427854	-7.56441670829	-53.4833686518	74.0980567295
8	1.13062205066	0.311035442449	0.311236187838	1.72797448541	-0.221512327264	1.272149926	-0.190451336657	0.0472934773428	-0.0831824771265	0.0639416088333	-0.0197782601306	-0.330013074285	0.0730798655955	0.322514646721	0.110547279676	0.214052635245	0.0533612209667	-0.0881734279284	0.394469946711	0.0722434824306	0.421152051884	-5.67359295229	-62.3272123695	65.8557779183
9	0.610374706053	0.37546379845	0.255406850366	0.24689238709	0.142784535021	0.454598461701	-0.140131661358	-0.278240501986	0.132151632559	0.226527875474	-0.263419165589	-0.319712979539	-0.162432155867	0.282461930021	0.181530935578	0.263863223913	0.0307833898281	-0.109583010778	0.48440564784	0.0522690133916	0.42458387567	-5.07314578971	-56.5887106043	69.8900627166
10	1.18195584611	-0.171074793483	0.411417893584	0.537955171243	0.60750580701	1.05003162048	0.00168995274857	0.0810478028001	0.0781116909834	-0.088308245124	0.00984531581462	-0.103924768806	-0.0483920824676	0.0247492259436	0.00156274174651	0.952772054499	-0.155690871542	-0.210087657989	1.08218847127	0.00638903717756	0.928981430756	24.9199344329	-39.4970692379	70.9912157305
11	0.00032824811787	0.000317290701422	-4.71479429187E-5	0.000718146816499	-0.000751834185829	0.000689780016152	0.325028252461	0.765448282024	0.121236097408	-0.701566416628	-0.429930950816	-0.0728061379646	0.239837865257	0.589723350371	0.10549498079	1.74470833249	0.0987350940416	-0.052981486107	1.67488978537	0.210646241967	1.60247703052	25.0540776699	-19.1900868731	52.7093405067
12	2.21715788016	-0.164396441633	-0.698756246624	0.960565042223	0.109998323408	2.04696231577	-0.0195557282846	-0.0589064345538	0.218616373869	0.225328512036	0.0927194463714	0.289535764473	-0.316878104875	-0.163421138311	-0.104045877426	0.932275968874	-0.114060799596	-0.475415494446	1.12351195602	0.130718450121	1.10809299542	19.6539349103	-34.5336442489	68.4123704087
13	0.076693883198	-0.189563111199	0.0162427001184	0.482979513583	-0.0353867654596	0.00434755026433	0.0788109303481	-0.134640252628	0.260132284069	-0.0659721365213	-0.0084976146667	0.105952127891	-0.379907936329	0.0132065691595	0.00542981717759	1.02807580762	0.0281764201027	-0.144374714205	1.11491845022	0.0340715027545	1.26335800858	15.4389413761	-23.6021215615	66.2477830771
14	2.21556483778	1.22848742002	0.0519338035017	3.33298594244	0.840979950664	1.87961519571	0.04954383492	0.104808554372	-0.0203080899297	-0.246706456901	-0.0416855043299	-0.161376402473	-0.0598547000474	0.102813499005	0.0136130997293	0.626753052758	-0.188236853711	-0.226667897134	0.937445505872	0.172135726881	1.1035161983	18.9904285698	-37.9846024257	63.4160191473
15	0.760425881293	-0.583670771143	0.671117256177	0.526672457691	-0.310090120295	1.12197107818	-0.0126082573565	0.0198251734324	0.118480764535	-0.0276082180356	-0.05620748374	-0.144957908924	-0.194347429678	0.152913182453	0.0577788393536	1.34014120419	-0.169755705156	-0.251987529195	1.32698518832	0.0952349955105	1.41277768427	22.4672059203	-25.8432075543	71.6397947781
16	1.97679288348	2.5106212197	-1.87850859884	3.18899587576	-2.38755225595	1.78996327515	0.111781205382	0.100186271233	0.347191430677	0.072390251825	0.164504195556	0.387087691296	-0.0529686386066	-0.424562619188	-0.254313386682	1.44251244383	-0.119598361691	-0.227529491183	1.46109552308	-0.0371356469112	1.47178351747	29.3442949082	-24.2090551713	69.7589309549
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165	0.358467693187	0.0234131220883	-0.174867107564	0.0415173865386	0.0405514617053	1.0776357898	-0.152078105675	-0.182119993692	0.031765483077	0.0249609827295	-0.00237141151085	0.0664764382747	0.0111947938638	-0.0547164372922	-0.0724210094186	0.200648801647	0.13295084338	0.0154952443146	0.377724876237	-0.0165942301668	0.215190146366	-44.3055932913	-60.8357971498	70.4457350051
166	0.126129232443	0.0233992756403	0.0444288259141	0.251554962886	-0.142717951043	1.96820022105	0.0997137498006	-0.233782735916	0.185755239794	-0.0512518042766	0.235473628862	-0.00947231413426	-0.0104337831747	0.0307255261793	-0.0625396661232	0.241159872917	0.155618272863	-0.00865803433197	0.783367850219	-0.0784467163921	0.367796305632	-38.6203678438	-61.5287169618	104.72546424
167	0.213186470248	0.170174516751	-0.653987707146	0.332030308481	-0.215930194273	2.55080708303	-0.101472884296	-0.192354435787	-0.179350836388	-0.0304632559427	0.020151010643	-0.0153811940222	0.107116074684	-0.114906046919	0.0379453140682	0.214418023976	0.0892941953861	0.016440221793	0.412271247127	-0.0164157820526	0.220392714562	-48.8939570522	-62.9988189427	65.6646202763
168	1.41431699964	-0.487737996523	1.82946727804	0.491746006569	-0.983213973113	3.90034526731	-0.0142824736408	-0.117500038385	0.0511380122977	0.0559798071833	0.127943982324	0.0582380777951	0.0141012771525	-0.170457028303	-0.0352932331945	0.276602879511	0.246264075562	0.0500724873596	0.621518833106	-0.0208281578307	0.305946790876	-43.2867665319	-63.9821061047	95.2413009874
169	0.892419058816	-0.199550513166	-0.298973685797	0.413685568723	0.127510280356	0.700929155737	0.0448818716289	-0.557644615443	0.0328432757666	0.341274670732	0.182976030756	-0.0991714167414	0.0949540990985	0.375126488591	0.00568586667681	0.454104933312	0.23520477291	0.0678392464437	0.92280315482	0.0272086047515	0.211038323224	-51.0187519527	-58.6646499785	131.510029601
170	1.80257989644	-0.120507537767	-0.839194910646	1.12024775897	-0.544497250112	1.8134331756	0.0364003869686	-0.10141805061	-0.0751853391132	0.144624707679	0.177708917796	-0.0195805591477	0.0268320730254	0.107161988019	-0.0833280674992	0.307623744537	0.222481285117	0.0170987739191	0.920760862351	0.00461000435109	0.225160809079	-55.7219279759	-60.1586191165	130.076166926
171	0.0772720125482	0.247588483782	-0.158645763635	0.879083597329	-0.250699379389	1.10928693011	0.0756547891684	0.317652118964	0.0617035260429	-0.337693436689	-0.121148095766	-0.296201006001	0.0496186717324	-0.0363922125757	-0.0136768326573	0.375770835577	0.144333469916	0.0490442247309	0.206960064871	0.00948324625366	0.356981886052	-46.5203028194	-28.7583787228	33.6612594147
172	0.974416931278	-1.58813178322	-0.0215715653963	3.18494435792	-0.227124933076	0.237544365007	-0.00710798405503	0.21530429581	0.00693535284995	-0.392204610155	-0.108391892933	-0.0935112172055	0.078744346808	0.102263260376	0.0251089354501	0.431513209066	0.0777607926198	0.140578762866	0.238193980475	-0.00507225721155	0.354536649693	-42.9892386731	-41.4787223749	34.6572034438
173	1.49717796682	0.0774108759095	0.298337734823	0.934502352804	-0.478116976848	0.611509262807	-0.0868310303947	-0.128783079586	0.314259667438	0.0889929001274	0.0204219171985	0.0357078253649	-0.139775537452	-0.110740741896	0.0188948168834	0.0710733563199	0.0733332939156	-0.0833013371943	0.168994255028	-0.039948020888	0.166035963608	-49.9547206747	-38.0670342541	44.068310154
174	1.46428515835	-0.917161323559	0.52997840049	2.43265137999	0.267249886924	0.680922077573	-0.070608425116	-0.100738948044	-0.127284889165	-0.237008015757	0.0210560874115	0.0871605978475	0.010375736112	-0.203765323894	0.0620759819825	0.271110405224	0.121448762196	-0.00153301913842	0.173491758098	0.0121592460336	0.237879432957	-52.7332137095	-38.4119053278	35.8286901073
175	0.238412297465	-0.539233938927	0.250691564276	2.27006765845	-1.09791823013	0.86504906807	0.0242719441166	0.0659840687389	0.159408646704	-0.0640976924535	-0.0922190796585	-0.270755032727	-0.260976593216	-0.10086200002	0.0510319275988	0.187034630765	0.128689312537	-0.0591395447678	0.165220127556	-0.0130642368318	0.263274368531	-46.6324807611	-31.765099508	42.126094734
176	0.577613697117	-0.22807138755	-0.126173365507	2.52318528876	0.030170239253	0.1484964581	-0.0845214452854	-0.0831732499116	0.197935446928	0.095082820296	0.0317064142457	-0.158422312392	-0.111532490268	0.00790401502667	0.048716412576	0.54462273436	0.18779150178	-0.247666231168	0.375632852752	0.00640147162846	0.624261981318	-50.9189454201	0.574627719327	36.7064511193
177	0.000906536583006	-0.00624891528973	0.00764954597474	0.197821200755	-0.283694080223	0.408774587978	0.115585694469	-1.08874713836	-0.237378711353	0.786883746329	0.00883515829834	-0.523344311581	-0.0340490159676	0.106384045731	-0.13373145161	1.27398144244	0.00282979814467	-0.106572557197	1.51203902053	-0.0483104718815	1.3166709636	-35.239353392	12.2080759576	55.5168239778
178	1.91560484768	1.44163279076	1.26411106543	4.39490042434	2.6727510909	4.02405276032	-0.0693956626329	0.0372085447578	0.0759476207839	0.0547488280907	0.0513400367573	-0.312029834324	-0.202119764895	0.277292184216	-0.0860784759269	0.46870409402	0.161666569275	-0.174144229653	0.355458968849	-0.00906700107249	0.675138531887	-45.4596464364	-1.0405519799	39.0943878814
179	0.270317633641	1.00159527526	-0.127439996629	3.72143829143	-0.46693513766	0.0620994240765	-0.0630104856019	0.0553373025551	-0.156780030758	-0.104902266281	0.0550871821475	-0.796169762132	-0.248072177353	0.688985044697	-0.0163079135377	0.902952599503	-0.152517004871	0.0753307937471	0.7491908798	-0.0570095580728	0.872264223331	-34.7801348645	6.3132744239	35.6456241355
180	2.66797994869	1.9923689048	-1.35981898978	3.61164743531	-0.879872040754	3.51138749516	0.0660218529744	-0.0994560273537	0.31590009252	0.0570210796887	-0.0719326110175	-0.47826501397	-0.42925750066	0.420041227505	0.0274467822494	0.482221834325	0.120795826468	-0.191797116242	0.351568509194	-0.0199242522966	0.738817071006	-36.049775946	-1.0071707023	43.5124415585
181	6.00723986626	-3.02976698993	1.56963678165	3.74507867077	-1.17367626909	1.09946199835	0.00691274049012	-0.0867554516172	0.217324924326	0.112378967332	0.00193478883489	0.318176105853	-0.261649044055	-0.320948533192	-0.000345379507916	0.385182963757	0.0586841997513	-0.10320772893	0.422465776875	-0.0559078982985	0.563309354146	-53.5716579837	-9.73723658659	41.7376045071
182	1.15243304178	-0.675422709877	-0.688322229437	1.31364534635	-0.433095224033	1.94808321362	0.0882274825863	-0.176580320877	0.267590687856	0.140664241684	0.0771136993771	-0.230338435543	-0.162389076477	0.15561192433	-0.0531690254216	0.508220373073	0.117839106299	-0.0914996705911	0.294601913002	-0.0106630764474	0.77055221556	-40.4121728239	1.32129354849	43.5316651379
183	0.92229803584	-0.527220045719	-0.38880377046	1.41509258142	-0.628725615475	0.814757016108	-0.0894630967931	-0.0240350519644	0.363661501202	-0.190863081122	0.112626766736	-0.145805778352	-0.45491937473	0.370434023324	-0.0209831634691	0.830862177818	-0.0487927388474	-0.0679287795872	0.49456885382	0.0890409155713	1.08286852869	-40.657478476	9.86143758504	36.7329078265
184	0.882609636156	-2.06313006439	-0.100680580516	4.97605963228	-0.756732244894	6.42641444466	0.0302626666894	-0.0260967481441	-0.0142226137429	0.164287083835	-0.169193121625	0.714919151477	0.427699993749	-0.527208884115	0.0480607552461	0.379710000945	0.0928850815644	-0.126432377314	0.317659364345	-0.107772841404	0.733307647367	-46.9488339193	-28.6058185418	60.4116683278
185	1.59841270163	1.34924362281	-0.744312650988	1.25012251502	-0.521206699934	0.7097160869	0.00457640983539	-0.132668741508	0.121594492332	0.138137362556	-0.0513003530672	-0.214006569927	-0.204514981904	0.0944093433568	-0.00883344508939	0.559500489207	0.128515704371	-0.383008054511	0.378715897813	-0.22485626587	0.880052510081	-30.8561634625	-25.0449911923	63.0574962436
186	0.421940432127	1.31332141911	0.531833745024	4.09402623076	1.65358449405	0.67051398772	-0.0186911708174	-0.469511664856	0.224480759754	0.539430648136	0.0123703489965	0.309411841807	-0.160867298693	-0.0927621698549	0.0143815128083	0.641801117482	0.0913423310179	-0.0742481243414	0.570964547259	-0.0965155131748	0.244793002209	-47.2133518826	-40.7780611131	63.7187886989
187	0.913587825939	-0.321129878292	0.123627769402	0.995092912465	-0.400641250262	0.596722692901	-0.0397111989132	-0.0202059895352	0.0702638830518	0.0620690546615	-0.0317276108959	-0.272139129782	0.0078032216488	0.154382141729	0.174872180528	0.230922002117	0.134057984756	-0.210954559342	0.240733599173	0.0191360856131	0.634521337167	-32.2229708614	-35.9286212375	53.0597692469
188	8.43800277236	-0.329720401182	-2.53437577114	2.68166757769	-0.0545552925598	4.06864394276	-0.0455651720097	-0.319705951792	-0.160308800389	0.241156445232	0.0228090230914	0.176432234033	0.0786692548806	-0.086826539447	0.03317194978	0.633852239434	0.0974981412965	-0.298787567206	0.387954950974	-0.113577512068	0.63446497316	-36.0686050132	-36.8978064976	65.0465476788
189	2.3388257296	-1.56227769819	0.667558376327	2.58215803888	-1.00500473606	1.58101736969	-0.0930489411364	-0.135861873243	0.106413482058	0.0980243580291	0.0804893494652	-0.0541191928291	-0.0243653016379	0.0444659894294	0.0445436076002	0.552867936494	0.143834448724	-0.31713165068	0.287474209867	-0.047380870525	0.5557119904	-32.520602437	-32.2621655442	63.3247553341
190	4.35338121595	0.763116417826	2.70930979308	0.568397196387	-0.463033940517	3.71419135714	0.0556266576471	0.405608159892	-0.0511235172148	-0.362913609742	-0.0690168929797	-0.168098471266	0.163824996481	0.288150493992	0.00155600640994	0.571575358601	-0.0991999882515	-0.195650860759	0.448591503109	0.116226151142	0.967211723445	-24.5463649999	-25.1723599116	54.1263951057
191	0.0982910521508	0.150427214975	0.14678463116	1.43315354713	-0.0928434685565	0.545535797422	-0.0553774512519	-0.018032685748	0.313933780836	0.0625765978448	0.0111884748193	0.0706030251059	-0.0397222522444	0.012191143906	0.0213466513497	0.174630776592	0.169907510224	-0.0673411844993	0.334548226202	0.0189781914576	0.3269179748	-45.6874037106	-35.5794693936	54.851506928
192	1.66705227332	0.184763027212	1.36514589144	1.11716782517	0.747768165724	2.37379548064	-0.0753308853314	0.22233193059	0.0750985721593	-0.123410897459	0.11457261327	-0.401878523858	-0.266271502053	0.231088131433	0.00713347360047	0.788831080004	-0.0238815278995	-0.399539955577	0.425624823625	0.101060057854	1.17517071302	-27.4868889636	-18.1612236295	56.4004229273
193	2.83320813412	-0.105098958787	-0.586580079953	0.592480053512	0.613884974589	0.723695513849	0.0784034992713	-0.0811359820187	-0.112148348817	0.0829800843848	0.0214498796998	-0.0487815172633	0.0517355963117	0.0136874416842	-0.04119319565	0.730174438299	0.10517036997	-0.386702916447	0.428894008721	-0.160544940087	0.961736621998	-38.8771485985	0.640923548522	55.2744128695
194	6.21715197687	4.93340644763	0.304188700891	4.41706925832	1.13506152865	1.60955870533	-0.121881274203	0.464747529175	0.460511800806	-0.385911328228	0.0740886470584	0.340674044348	-0.240084931187	-0.221445484077	0.00947623071019	0.71438172456	0.245410378043	-0.143294991782	0.656532177888	-0.0306373739941	0.950012692262	-56.8464918974	9.22916198142	43.7782300918
195	1.82019277468	-1.27042566612	0.966579901709	3.14253401709	-1.04564770113	1.20257599192	0.00692269228742	-0.0805060830906	-0.0722656075619	0.335948390041	-0.0746618020172	0.0784096082384	-0.0470745801087	-0.0734705900429	0.0442827804911	0.891728912539	0.0109358280964	-0.257290251157	0.310257144477	-0.174058975389	0.889244469625	-42.1317317167	-4.66660103772	55.6320247896
196	2.0938252279	-0.780737772978	-1.0285901958	0.503436716857	0.162147644269	0.739335447925	-0.054420669103	-0.368956007665	0.222271389368	0.517666340423	-0.104545985134	0.397818350536	-0.11834481036	-0.380440284655	0.127673180665	1.16272538842	-0.0698207043958	-0.099740815576	0.780736007	-0.152856864991	0.66797553549	-54.5055577334	-4.81656645622	58.328295007
197	0.514171876211	0.727952170047	0.875297693978	1.76984154385	0.717180937571	2.00043135848	-0.0652723130057	0.280157504819	0.158659006343	-0.206627690707	0.0639054621239	-0.486593568493	-0.221269675594	0.517508200648	-0.00255132143945	0.700689627319	0.12431826769	-0.290204758697	0.557817135326	-0.129717089632	1.05668350031	-32.0459772669	-9.19701990523	48.5766682397
198	1.22478117847	-1.40773630489	-0.527775552364	4.7468973006	0.380730423449	3.419007711	-0.105919199191	-0.12470235603	-0.190710403959	0.127583251041	0.087038650618	-0.0171175115128	0.0515556512963	0.00534367253442	0.0387677624265	0.53259102689	0.0337625304535	-0.104235899712	0.36567496034	-0.122394414373	0.577701077109	-45.4090944627	-4.60296301267	50.6556428599
199	0.000767149807953	-0.0158445766695	-0.0329832868988	0.77523960315	1.59118738789	3.26744248548	-0.0208515181531	-0.172804011801	0.0821925908332	0.10418867446	-0.0537437958498	0.288554475926	-0.086353374242	-0.445199047622	0.0740862991352	1.02699604628	0.121144081866	0.119468350144	0.93360608385	-0.271643050829	1.25751594039	-59.3843071401	6.88020974618	56.4113531018
200	0.797589667382	0.560601499877	-0.216547656812	0.538055004584	0.218508521709	1.11758284131	-0.244158953433	-0.411445105457	-0.145064087546	0.312984133789	0.157237128617	0.119418138455	-0.040824822501	-0.120632172454	0.0148432274453	0.969588620203	-0.074440692785	-0.12684025603	0.743970050932	-0.0563825742499	0.779948106847	-43.7256789911	-3.59387947647	61.755720374
201	4.2837890939	-0.611303374626	0.524758431017	0.148877565655	0.0174222357531	0.215330711706	-0.314794764475	-0.454602419339	-0.146159328016	0.546092306913	0.363314110819	0.0667754414048	-0.100293369535	-0.199300076272	-0.0641179524806	0.997372637033	0.0957787398731	-0.0881328295216	0.702841367402	-0.300270599187	0.854261490559	-44.4837974938	3.00794244833	61.7558568259

精密化 TLSグループ

Refine-ID: X-RAY DIFFRACTION

ID	Refine TLS-ID	Selection details	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	1	chain 'A' and (resid 1 through 26 )	A	A	1 - 26	1 - 26
2	2	chain 'A' and (resid 27 through 167 )	A	A	27 - 167	27 - 167
3	3	chain 'A' and (resid 168 through 201 )	A	A	168 - 201	168 - 201
4	4	chain 'A' and (resid 202 through 243 )	A	A	202 - 243	202 - 243
5	5	chain 'A' and (resid 244 through 296 )	A	A	244 - 296	244 - 296
6	6	chain 'A' and (resid 297 through 392 )	A	A	297 - 392	297 - 392
7	7	chain 'H' and (resid 2 through 32 )	H	B	2 - 32	1 - 31
8	8	chain 'H' and (resid 33 through 67 )	H	B	33 - 67	32 - 66
9	9	chain 'H' and (resid 68 through 117 )	H	B	68 - 117	67 - 116
10	10	chain 'H' and (resid 118 through 128 )	H	B	118 - 128	117 - 127
11	11	chain 'H' and (resid 129 through 139 )	H	B	129 - 139	128 - 138
12	12	chain 'H' and (resid 140 through 158 )	H	B	140 - 158	139 - 157
13	13	chain 'H' and (resid 159 through 170 )	H	B	159 - 170	158 - 169
14	14	chain 'H' and (resid 171 through 188 )	H	B	171 - 188	170 - 187
15	15	chain 'H' and (resid 189 through 211 )	H	B	189 - 211	188 - 210
16	16	chain 'H' and (resid 212 through 217 )	H	B	212 - 217	211 - 216
17	17	chain 'L' and (resid 1 through 8 )	L	C	1 - 8	1 - 8
18	18	chain 'L' and (resid 9 through 23 )	L	C	9 - 23	9 - 23
19	19	chain 'L' and (resid 24 through 34 )	L	C	24 - 34	24 - 34
20	20	chain 'L' and (resid 35 through 50 )	L	C	35 - 50	35 - 50
21	21	chain 'L' and (resid 51 through 77 )	L	C	51 - 77	51 - 77
22	22	chain 'L' and (resid 78 through 93 )	L	C	78 - 93	78 - 93
23	23	chain 'L' and (resid 94 through 105 )	L	C	94 - 105	94 - 105
24	24	chain 'L' and (resid 106 through 113 )	L	C	106 - 113	106 - 113
25	25	chain 'L' and (resid 114 through 126 )	L	C	114 - 126	114 - 126
26	26	chain 'L' and (resid 127 through 134 )	L	C	127 - 134	127 - 134
27	27	chain 'L' and (resid 135 through 149 )	L	C	135 - 149	135 - 149
28	28	chain 'L' and (resid 150 through 166 )	L	C	150 - 166	150 - 166
29	29	chain 'L' and (resid 167 through 176 )	L	C	167 - 176	167 - 176
30	30	chain 'L' and (resid 177 through 185 )	L	C	177 - 185	177 - 185
31	31	chain 'L' and (resid 186 through 192 )	L	C	186 - 192	186 - 192
32	32	chain 'L' and (resid 193 through 214 )	L	C	193 - 214	193 - 214
33	33	chain 'E' and (resid 1 through 26 )	E	D	1 - 26	1 - 26
34	34	chain 'E' and (resid 27 through 143 )	E	D	27 - 143	27 - 143
35	35	chain 'E' and (resid 144 through 200 )	E	D	144 - 200	144 - 200
36	36	chain 'E' and (resid 201 through 243 )	E	D	201 - 243	201 - 243
37	37	chain 'E' and (resid 244 through 272 )	E	D	244 - 272	244 - 272
38	38	chain 'E' and (resid 273 through 367 )	E	D	273 - 367	273 - 367
39	39	chain 'E' and (resid 368 through 392 )	E	D	368 - 392	368 - 392
40	40	chain 'F' and (resid 2 through 16 )	F	E	2 - 16	1 - 15
41	41	chain 'F' and (resid 17 through 32 )	F	E	17 - 32	16 - 31
42	42	chain 'F' and (resid 33 through 60 )	F	E	33 - 60	32 - 59
43	43	chain 'F' and (resid 61 through 68 )	F	E	61 - 68	60 - 67
44	44	chain 'F' and (resid 69 through 84 )	F	E	69 - 84	68 - 83
45	45	chain 'F' and (resid 85 through 99 )	F	E	85 - 99	84 - 98
46	46	chain 'F' and (resid 100 through 117 )	F	E	100 - 117	99 - 116
47	47	chain 'F' and (resid 118 through 128 )	F	E	118 - 128	117 - 127
48	48	chain 'F' and (resid 129 through 139 )	F	E	129 - 139	128 - 138
49	49	chain 'F' and (resid 140 through 161 )	F	E	140 - 161	139 - 160
50	50	chain 'F' and (resid 162 through 170 )	F	E	162 - 170	161 - 169
51	51	chain 'F' and (resid 171 through 188 )	F	E	171 - 188	170 - 187
52	52	chain 'F' and (resid 189 through 197 )	F	E	189 - 197	188 - 196
53	53	chain 'F' and (resid 198 through 208 )	F	E	198 - 208	197 - 207
54	54	chain 'F' and (resid 209 through 217 )	F	E	209 - 217	208 - 216
55	55	chain 'G' and (resid 2 through 23 )	G	F	2 - 23	1 - 22
56	56	chain 'G' and (resid 24 through 34 )	G	F	24 - 34	23 - 33
57	57	chain 'G' and (resid 35 through 50 )	G	F	35 - 50	34 - 49
58	58	chain 'G' and (resid 51 through 63 )	G	F	51 - 63	50 - 62
59	59	chain 'G' and (resid 64 through 78 )	G	F	64 - 78	63 - 77
60	60	chain 'G' and (resid 79 through 93 )	G	F	79 - 93	78 - 92
61	61	chain 'G' and (resid 94 through 99 )	G	F	94 - 99	93 - 98
62	62	chain 'G' and (resid 100 through 113 )	G	F	100 - 113	99 - 112
63	63	chain 'G' and (resid 114 through 118 )	G	F	114 - 118	113 - 117
64	64	chain 'G' and (resid 119 through 126 )	G	F	119 - 126	118 - 125
65	65	chain 'G' and (resid 127 through 134 )	G	F	127 - 134	126 - 133
66	66	chain 'G' and (resid 135 through 149 )	G	F	135 - 149	134 - 148
67	67	chain 'G' and (resid 150 through 155 )	G	F	150 - 155	149 - 154
68	68	chain 'G' and (resid 156 through 166 )	G	F	156 - 166	155 - 165
69	69	chain 'G' and (resid 167 through 185 )	G	F	167 - 185	166 - 184
70	70	chain 'G' and (resid 186 through 192 )	G	F	186 - 192	185 - 191
71	71	chain 'G' and (resid 193 through 202 )	G	F	193 - 202	192 - 201
72	72	chain 'G' and (resid 203 through 211 )	G	F	203 - 211	202 - 210
73	73	chain 'G' and (resid 212 through 217 )	G	F	212 - 217	211 - 216
74	74	chain 'B' and (resid 1 through 201 )	B	G	1 - 201	1 - 201
75	75	chain 'B' and (resid 202 through 273 )	B	G	202 - 273	202 - 269
76	76	chain 'B' and (resid 274 through 392 )	B	G	274 - 392	270 - 388
77	77	chain 'C' and (resid 2 through 25 )	C	H	2 - 25	1 - 24
78	78	chain 'C' and (resid 26 through 32 )	C	H	26 - 32	25 - 31
79	79	chain 'C' and (resid 33 through 51 )	C	H	33 - 51	32 - 50
80	80	chain 'C' and (resid 52 through 67 )	C	H	52 - 67	51 - 66
81	81	chain 'C' and (resid 68 through 91 )	C	H	68 - 91	67 - 90
82	82	chain 'C' and (resid 92 through 117 )	C	H	92 - 117	91 - 116
83	83	chain 'C' and (resid 118 through 128 )	C	H	118 - 128	117 - 127
84	84	chain 'C' and (resid 129 through 139 )	C	H	129 - 139	128 - 138
85	85	chain 'C' and (resid 140 through 158 )	C	H	140 - 158	139 - 157
86	86	chain 'C' and (resid 159 through 181 )	C	H	159 - 181	158 - 180
87	87	chain 'C' and (resid 182 through 188 )	C	H	182 - 188	181 - 187
88	88	chain 'C' and (resid 189 through 201 )	C	H	189 - 201	188 - 200
89	89	chain 'C' and (resid 202 through 217 )	C	H	202 - 217	201 - 216
90	90	chain 'D' and (resid 1 through 12 )	D	I	1 - 12	1 - 12
91	91	chain 'D' and (resid 13 through 26 )	D	I	13 - 26	13 - 26
92	92	chain 'D' and (resid 27 through 34 )	D	I	27 - 34	27 - 34
93	93	chain 'D' and (resid 35 through 50 )	D	I	35 - 50	35 - 50
94	94	chain 'D' and (resid 51 through 77 )	D	I	51 - 77	51 - 77
95	95	chain 'D' and (resid 78 through 93 )	D	I	78 - 93	78 - 93
96	96	chain 'D' and (resid 94 through 106 )	D	I	94 - 106	94 - 106
97	97	chain 'D' and (resid 107 through 113 )	D	I	107 - 113	107 - 113
98	98	chain 'D' and (resid 114 through 129 )	D	I	114 - 129	114 - 129
99	99	chain 'D' and (resid 130 through 134 )	D	I	130 - 134	130 - 134
100	100	chain 'D' and (resid 135 through 149 )	D	I	135 - 149	135 - 149
101	101	chain 'D' and (resid 150 through 166 )	D	I	150 - 166	150 - 166
102	102	chain 'D' and (resid 167 through 185 )	D	I	167 - 185	167 - 185
103	103	chain 'D' and (resid 186 through 192 )	D	I	186 - 192	186 - 192
104	104	chain 'D' and (resid 193 through 213 )	D	I	193 - 213	193 - 213
105	105	chain 'I' and (resid 1 through 34 )	I	J	1 - 34	1 - 34
106	106	chain 'I' and (resid 35 through 167 )	I	J	35 - 167	35 - 167
107	107	chain 'I' and (resid 168 through 201 )	I	J	168 - 201	168 - 201
108	108	chain 'I' and (resid 202 through 257 )	I	J	202 - 257	202 - 257
109	109	chain 'I' and (resid 258 through 286 )	I	J	258 - 286	258 - 282
110	110	chain 'I' and (resid 287 through 392 )	I	J	287 - 392	283 - 388
111	111	chain 'J' and (resid 2 through 32 )	J	K	2 - 32	1 - 31
112	112	chain 'J' and (resid 33 through 57 )	J	K	33 - 57	32 - 56
113	113	chain 'J' and (resid 58 through 73 )	J	K	58 - 73	57 - 72
114	114	chain 'J' and (resid 74 through 84 )	J	K	74 - 84	73 - 83
115	115	chain 'J' and (resid 85 through 91 )	J	K	85 - 91	84 - 90
116	116	chain 'J' and (resid 92 through 110 )	J	K	92 - 110	91 - 109
117	117	chain 'J' and (resid 111 through 117 )	J	K	111 - 117	110 - 116
118	118	chain 'J' and (resid 118 through 124 )	J	K	118 - 124	117 - 123
119	119	chain 'J' and (resid 125 through 149 )	J	K	125 - 149	124 - 143
120	120	chain 'J' and (resid 150 through 154 )	J	K	150 - 154	144 - 148
121	121	chain 'J' and (resid 155 through 159 )	J	K	155 - 159	149 - 153
122	122	chain 'J' and (resid 160 through 164 )	J	K	160 - 164	154 - 158
123	123	chain 'J' and (resid 165 through 174 )	J	K	165 - 174	159 - 168
124	124	chain 'J' and (resid 175 through 212 )	J	K	175 - 212	169 - 206
125	125	chain 'J' and (resid 213 through 217 )	J	K	213 - 217	207 - 211
126	126	chain 'K' and (resid 1 through 8 )	K	L	1 - 8	1 - 8
127	127	chain 'K' and (resid 9 through 23 )	K	L	9 - 23	9 - 23
128	128	chain 'K' and (resid 24 through 34 )	K	L	24 - 34	24 - 34
129	129	chain 'K' and (resid 35 through 50 )	K	L	35 - 50	35 - 50
130	130	chain 'K' and (resid 51 through 69 )	K	L	51 - 69	51 - 69
131	131	chain 'K' and (resid 70 through 92 )	K	L	70 - 92	70 - 92
132	132	chain 'K' and (resid 93 through 113 )	K	L	93 - 113	93 - 113
133	133	chain 'K' and (resid 114 through 134 )	K	L	114 - 134	114 - 134
134	134	chain 'K' and (resid 135 through 155 )	K	L	135 - 155	135 - 155
135	135	chain 'K' and (resid 156 through 185 )	K	L	156 - 185	156 - 185
136	136	chain 'K' and (resid 186 through 214 )	K	L	186 - 214	186 - 214
137	137	chain 'M' and (resid 1 through 143 )	M	M	1 - 143	1 - 143
138	138	chain 'M' and (resid 144 through 201 )	M	M	144 - 201	144 - 201
139	139	chain 'M' and (resid 202 through 257 )	M	M	202 - 257	202 - 257
140	140	chain 'M' and (resid 258 through 392 )	M	M	258 - 392	258 - 388
141	141	chain 'N' and (resid 2 through 32 )	N	N	2 - 32	1 - 31
142	142	chain 'N' and (resid 33 through 60 )	N	N	33 - 60	32 - 59
143	143	chain 'N' and (resid 61 through 77 )	N	N	61 - 77	60 - 76
144	144	chain 'N' and (resid 78 through 117 )	N	N	78 - 117	77 - 116
145	145	chain 'N' and (resid 118 through 139 )	N	N	118 - 139	117 - 138
146	146	chain 'N' and (resid 140 through 168 )	N	N	140 - 168	139 - 167
147	147	chain 'N' and (resid 169 through 188 )	N	N	169 - 188	168 - 187
148	148	chain 'N' and (resid 189 through 197 )	N	N	189 - 197	188 - 196
149	149	chain 'N' and (resid 198 through 217 )	N	N	198 - 217	197 - 216
150	150	chain 'O' and (resid 1 through 23 )	O	O	1 - 23	1 - 23
151	151	chain 'O' and (resid 24 through 34 )	O	O	24 - 34	24 - 34
152	152	chain 'O' and (resid 35 through 63 )	O	O	35 - 63	35 - 63
153	153	chain 'O' and (resid 64 through 77 )	O	O	64 - 77	64 - 77
154	154	chain 'O' and (resid 78 through 106 )	O	O	78 - 106	78 - 106
155	155	chain 'O' and (resid 107 through 113 )	O	O	107 - 113	107 - 113
156	156	chain 'O' and (resid 114 through 126 )	O	O	114 - 126	114 - 126
157	157	chain 'O' and (resid 127 through 134 )	O	O	127 - 134	127 - 134
158	158	chain 'O' and (resid 135 through 160 )	O	O	135 - 160	135 - 160
159	159	chain 'O' and (resid 161 through 165 )	O	O	161 - 165	161 - 165
160	160	chain 'O' and (resid 166 through 185 )	O	O	166 - 185	166 - 185
161	161	chain 'O' and (resid 186 through 192 )	O	O	186 - 192	186 - 192
162	162	chain 'O' and (resid 193 through 208 )	O	O	193 - 208	193 - 208
163	163	chain 'O' and (resid 209 through 217 )	O	O	209 - 217	209 - 217
164	164	chain 'P' and (resid 1 through 26 )	P	P	1 - 26	1 - 26
165	165	chain 'P' and (resid 27 through 143 )	P	P	27 - 143	27 - 143
166	166	chain 'P' and (resid 144 through 201 )	P	P	144 - 201	144 - 201
167	167	chain 'P' and (resid 202 through 257 )	P	P	202 - 257	202 - 257
168	168	chain 'P' and (resid 258 through 286 )	P	P	258 - 286	258 - 282
169	169	chain 'P' and (resid 287 through 347 )	P	P	287 - 347	283 - 343
170	170	chain 'P' and (resid 348 through 392 )	P	P	348 - 392	344 - 388
171	171	chain 'Q' and (resid 2 through 16 )	Q	Q	2 - 16	1 - 15
172	172	chain 'Q' and (resid 17 through 32 )	Q	Q	17 - 32	16 - 31
173	173	chain 'Q' and (resid 33 through 60 )	Q	Q	33 - 60	32 - 59
174	174	chain 'Q' and (resid 61 through 84 )	Q	Q	61 - 84	60 - 83
175	175	chain 'Q' and (resid 85 through 117 )	Q	Q	85 - 117	84 - 116
176	176	chain 'Q' and (resid 118 through 128 )	Q	Q	118 - 128	117 - 127
177	177	chain 'Q' and (resid 129 through 139 )	Q	Q	129 - 139	128 - 138
178	178	chain 'Q' and (resid 140 through 154 )	Q	Q	140 - 154	139 - 153
179	179	chain 'Q' and (resid 155 through 163 )	Q	Q	155 - 163	154 - 162
180	180	chain 'Q' and (resid 164 through 173 )	Q	Q	164 - 173	163 - 172
181	181	chain 'Q' and (resid 174 through 179 )	Q	Q	174 - 179	173 - 178
182	182	chain 'Q' and (resid 180 through 188 )	Q	Q	180 - 188	179 - 187
183	183	chain 'Q' and (resid 189 through 217 )	Q	Q	189 - 217	188 - 216
184	184	chain 'R' and (resid 1 through 8 )	R	R	1 - 8	1 - 8
185	185	chain 'R' and (resid 9 through 23 )	R	R	9 - 23	9 - 23
186	186	chain 'R' and (resid 24 through 34 )	R	R	24 - 34	24 - 34
187	187	chain 'R' and (resid 35 through 63 )	R	R	35 - 63	35 - 63
188	188	chain 'R' and (resid 64 through 71 )	R	R	64 - 71	64 - 71
189	189	chain 'R' and (resid 72 through 78 )	R	R	72 - 78	72 - 78
190	190	chain 'R' and (resid 79 through 86 )	R	R	79 - 86	79 - 86
191	191	chain 'R' and (resid 87 through 106 )	R	R	87 - 106	87 - 106
192	192	chain 'R' and (resid 107 through 113 )	R	R	107 - 113	107 - 113
193	193	chain 'R' and (resid 114 through 126 )	R	R	114 - 126	114 - 126
194	194	chain 'R' and (resid 127 through 134 )	R	R	127 - 134	127 - 134
195	195	chain 'R' and (resid 135 through 155 )	R	R	135 - 155	135 - 155
196	196	chain 'R' and (resid 156 through 166 )	R	R	156 - 166	156 - 166
197	197	chain 'R' and (resid 167 through 176 )	R	R	167 - 176	167 - 176
198	198	chain 'R' and (resid 177 through 185 )	R	R	177 - 185	177 - 185
199	199	chain 'R' and (resid 186 through 194 )	R	R	186 - 194	186 - 194
200	200	chain 'R' and (resid 195 through 204 )	R	R	195 - 204	195 - 204
201	201	chain 'R' and (resid 205 through 213 )	R	R	205 - 213	205 - 213

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

-
2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

すべてのお知らせ

-
万見 (Yorodumi)

幾万の構造データを、幾万の視点から

万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る

-
ムービー

-
構造ビューア

+
ビューアのログ

-
このページ

-
このウェブサイト

-
オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

-
実験情報

-
実験

-
試料調製

-
データ収集

-
解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)

-ムービー

-構造ビューア

+ビューアのログ

-このページ

-このウェブサイト

-オプション

+データを開く

-基本情報

-構造の表示

-ダウンロードとリンク

-ダウンロード

-検証レポート

-関連構造データ

-リンク

-集合体

-要素

-実験情報

-実験

-試料調製

-データ収集

-解析

+万見について

-お知らせ

-2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-2020年8月12日: 新型コロナ情報

+2020年3月5日: 新型コロナウイルスの構造データ

+2019年1月31日: EMDBのIDの桁数の変更

+2017年7月12日: PDB大規模アップデート

-万見 (Yorodumi)

-
ムービー

-
構造ビューア

+
ビューアのログ

-
このページ

-
このウェブサイト

-
オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

-
実験情報

-
実験

-
試料調製

-
データ収集

-
解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)