+Open data
-Basic information
Entry | Database: PDB / ID: 8e8u | |||||||||
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Title | Structure of the LOR domain of human AASS | |||||||||
Components | Alpha-aminoadipic semialdehyde synthase, mitochondrial | |||||||||
Keywords | OXIDOREDUCTASE / lysine metabolism / ketoglutarate / mitochondrial / reductase | |||||||||
Function / homology | Function and homology information saccharopine dehydrogenase (NADP+, L-lysine-forming) / saccharopine dehydrogenase (NAD+, L-glutamate-forming) / saccharopine dehydrogenase (NADP+, L-lysine-forming) activity / saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity / saccharopine dehydrogenase activity / saccharopine dehydrogenase (NAD+, L-lysine-forming) activity / lysine catabolic process / L-lysine catabolic process to acetyl-CoA via saccharopine / lysine biosynthetic process via aminoadipic acid / Lysine catabolism ...saccharopine dehydrogenase (NADP+, L-lysine-forming) / saccharopine dehydrogenase (NAD+, L-glutamate-forming) / saccharopine dehydrogenase (NADP+, L-lysine-forming) activity / saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity / saccharopine dehydrogenase activity / saccharopine dehydrogenase (NAD+, L-lysine-forming) activity / lysine catabolic process / L-lysine catabolic process to acetyl-CoA via saccharopine / lysine biosynthetic process via aminoadipic acid / Lysine catabolism / transcription corepressor activity / histone binding / mitochondrial matrix / intracellular membrane-bounded organelle / negative regulation of transcription by RNA polymerase II / mitochondrion / nucleus / cytoplasm / cytosol Similarity search - Function | |||||||||
Biological species | Homo sapiens (human) | |||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.65 Å | |||||||||
Authors | Khamrui, S. / Lazarus, M.B. | |||||||||
Funding support | United States, 2items
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Citation | Journal: Open Biology / Year: 2022 Title: Characterization and structure of the human lysine-2-oxoglutarate reductase domain, a novel therapeutic target for treatment of glutaric aciduria type 1. Authors: Leandro, J. / Khamrui, S. / Suebsuwong, C. / Chen, P.J. / Secor, C. / Dodatko, T. / Yu, C. / Sanchez, R. / DeVita, R.J. / Houten, S.M. / Lazarus, M.B. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 8e8u.cif.gz | 678.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb8e8u.ent.gz | 562.5 KB | Display | PDB format |
PDBx/mmJSON format | 8e8u.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 8e8u_validation.pdf.gz | 1.4 MB | Display | wwPDB validaton report |
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Full document | 8e8u_full_validation.pdf.gz | 1.4 MB | Display | |
Data in XML | 8e8u_validation.xml.gz | 57.2 KB | Display | |
Data in CIF | 8e8u_validation.cif.gz | 77.1 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/e8/8e8u ftp://data.pdbj.org/pub/pdb/validation_reports/e8/8e8u | HTTPS FTP |
-Related structure data
Related structure data | 8e8tSC 8e8vC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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