[English] 日本語
Yorodumi
- PDB-8d1x: Crystal Structure of aminopeptidase A from Neisseria gonorrhoeae -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: PDB / ID: 8d1x
TitleCrystal Structure of aminopeptidase A from Neisseria gonorrhoeae
ComponentsProbable cytosol aminopeptidase
KeywordsHYDROLASE / SSGCID / aminopeptidase A / Neisseria gonorrhoeae / Structural Genomics / Seattle Structural Genomics Center for Infectious Disease
Function / homology
Function and homology information


bacterial leucyl aminopeptidase / leucyl aminopeptidase / metalloaminopeptidase activity / manganese ion binding / cytoplasm
Similarity search - Function
Peptidase M17, leucyl aminopeptidase, N-terminal / Cytosol aminopeptidase family, N-terminal domain / Peptidase M17, leucine aminopeptidase / Cytosol aminopeptidase signature. / Peptidase M17, leucyl aminopeptidase, C-terminal / Peptidase M17, leucine aminopeptidase/peptidase B / Cytosol aminopeptidase family, catalytic domain / Macro domain-like
Similarity search - Domain/homology
ACETATE ION / : / D(-)-TARTARIC ACID / Probable cytosol aminopeptidase
Similarity search - Component
Biological speciesNeisseria gonorrhoeae NCCP11945 (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.8 Å
AuthorsSeattle Structural Genomics Center for Infectious Disease / Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Funding support United States, 1items
OrganizationGrant numberCountry
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)HHSN272201700059C United States
CitationJournal: to be published
Title: Crystal Structure of aminopeptidase A from Neisseria gonorrhoeae
Authors: Abendroth, J. / DeBouver, N.D. / Lorimer, D.D. / Horanyi, P.S. / Edwards, T.E.
History
DepositionMay 27, 2022Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jun 8, 2022Provider: repository / Type: Initial release
Revision 1.1Oct 18, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model

-
Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

-
Assembly

Deposited unit
A: Probable cytosol aminopeptidase
B: Probable cytosol aminopeptidase
C: Probable cytosol aminopeptidase
D: Probable cytosol aminopeptidase
E: Probable cytosol aminopeptidase
F: Probable cytosol aminopeptidase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)308,33728
Polymers306,6586
Non-polymers1,67922
Water7,350408
1


  • Idetical with deposited unit
  • defined by author
  • Evidence: gel filtration
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)96.610, 93.250, 179.470
Angle α, β, γ (deg.)90.000, 101.324, 90.000
Int Tables number4
Space group name H-MP1211
Space group name HallP2yb
Symmetry operation#1: x,y,z
#2: -x,y+1/2,-z
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
d_1ens_1(chain "A" and ((resid 2 and (name N or name...
d_2ens_1(chain "B" and (resid 2 through 5 or (resid 6...
d_3ens_1(chain "C" and (resid 2 through 44 or (resid 45...
d_4ens_1(chain "D" and ((resid 2 and (name N or name...
d_5ens_1(chain "E" and (resid 2 through 8 or (resid 9...
d_6ens_1(chain "F" and ((resid 2 and (name N or name...

NCS domain segments:
Dom-IDComponent-IDEns-IDBeg label comp-IDEnd label comp-IDLabel asym-IDLabel seq-ID
d_11ens_1GLULEUA2 - 468
d_12ens_1MNMNB
d_13ens_1CLCLC
d_14ens_1TARTARD
d_21ens_1GLULEUF2 - 468
d_22ens_1MNMNG
d_23ens_1CLCLH
d_24ens_1TARTARI
d_31ens_1GLULEUK1 - 467
d_32ens_1MNMNL
d_33ens_1CLCLM
d_34ens_1TARTARN
d_41ens_1GLULEUO3 - 469
d_42ens_1MNMNP
d_43ens_1CLCLQ
d_44ens_1TARTARR
d_51ens_1GLULEUS2 - 468
d_52ens_1MNMNT
d_53ens_1CLCLU
d_54ens_1TARTARV
d_61ens_1GLULEUX3 - 469
d_62ens_1MNMNY
d_63ens_1CLCLZ
d_64ens_1TARTARAA

NCS oper:
IDCodeMatrixVector
1given(0.319910664122, 0.681252626283, -0.658446676781), (0.681437013485, -0.648286191278, -0.339659551391), (-0.658255849677, -0.340029224304, -0.671624421076)19.0089391026, 12.2127537664, 50.5390126903
2given(-0.0687647969063, 0.599281139256, 0.797579788384), (0.599069353461, -0.614478709282, 0.513353509371), (0.797738874852, 0.513106257974, -0.316756460988)-54.3536544894, -25.9301945754, 83.0005354728
3given(-0.14652535741, -0.705471303578, -0.693426679227), (-0.568204575048, 0.633836435377, -0.52478084386), (0.809736920568, 0.317114510889, -0.493725132491)-8.14561258114, 3.56281508579, 88.5495279101
4given(-0.141306239008, -0.565757153213, 0.812373922776), (-0.701935875971, 0.63591759686, 0.320772249469), (-0.698082067412, -0.524907280949, -0.486984366858)-70.8762167707, -36.0963134246, 39.5601922
5given(-0.96651085562, -0.00170563927684, -0.256620063058), (-0.0110432425374, -0.998775173333, 0.0482306948666), (-0.256388012129, 0.049449407759, 0.965308211562)-39.428155481, -26.0823079854, -4.47583507834

-
Components

-
Protein , 1 types, 6 molecules ABCDEF

#1: Protein
Probable cytosol aminopeptidase / Leucine aminopeptidase / LAP / Leucyl aminopeptidase


Mass: 51109.688 Da / Num. of mol.: 6 / Fragment: NegoA.00799.a.B1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Neisseria gonorrhoeae NCCP11945 (bacteria)
Strain: NCCP11945 / Gene: pepA, NGK_0283 / Plasmid: NegoA.00799.a.B1 / Production host: Escherichia coli BL21(DE3) (bacteria)
References: UniProt: B4RJ22, leucyl aminopeptidase, bacterial leucyl aminopeptidase

-
Non-polymers , 5 types, 430 molecules

#2: Chemical
ChemComp-MN / MANGANESE (II) ION


Mass: 54.938 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: Mn / Feature type: SUBJECT OF INVESTIGATION
#3: Chemical
ChemComp-CL / CHLORIDE ION


Mass: 35.453 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: Cl
#4: Chemical
ChemComp-TAR / D(-)-TARTARIC ACID


Mass: 150.087 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C4H6O6
#5: Chemical
ChemComp-ACT / ACETATE ION


Mass: 59.044 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C2H3O2
#6: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 408 / Source method: isolated from a natural source / Formula: H2O

-
Details

Has ligand of interestY

-
Experimental details

-
Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

CrystalDensity Matthews: 2.59 Å3/Da / Density % sol: 52.58 %
Crystal growTemperature: 287 K / Method: vapor diffusion, sitting drop / pH: 8.5
Details: Molecular Dimensions / Calibre Morpheus screen, condition G6: 10% w/v PEG 8000, 20% v/v ethylene glycol: 20mM of each sodium formate, ammonium acetate, trisodium citrate, sodium potassium L- ...Details: Molecular Dimensions / Calibre Morpheus screen, condition G6: 10% w/v PEG 8000, 20% v/v ethylene glycol: 20mM of each sodium formate, ammonium acetate, trisodium citrate, sodium potassium L-tartrate, sodium oxamate, 100mM MOPS/HEPES-Na pH 7.5: NegoA.00799.a.B1.PW37906 at 19mg/ml + 2mM MnCl2: tray 273710 g6: cryo: direct: puck ifb3-2.

-
Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 21-ID-F / Wavelength: 0.97872 Å
DetectorType: RAYONIX MX-300 / Detector: CCD / Date: Aug 4, 2016 / Details: Beryllium Lenses
RadiationMonochromator: Diamond [111] / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.97872 Å / Relative weight: 1
ReflectionResolution: 2.8→50 Å / Num. obs: 77236 / % possible obs: 99.9 % / Redundancy: 4.263 % / Biso Wilson estimate: 43.878 Å2 / CC1/2: 0.992 / Rmerge(I) obs: 0.122 / Rrim(I) all: 0.139 / Χ2: 0.968 / Net I/σ(I): 9.61
Reflection shell

Diffraction-ID: 1

Resolution (Å)Redundancy (%)Rmerge(I) obsMean I/σ(I) obsNum. unique obsCC1/2Rrim(I) all% possible all
2.8-2.874.3020.5512.5856670.8270.63100
2.87-2.954.2930.453.1155430.870.51599.9
2.95-3.044.2930.3683.8653880.90.421100
3.04-3.134.290.3214.3652530.9230.36799.9
3.13-3.234.2960.2565.350790.9490.29399.9
3.23-3.354.2890.2166.2749110.9610.247100
3.35-3.474.2910.1687.8547500.9750.19299.9
3.47-3.614.2850.1468.9445620.9790.16799.9
3.61-3.784.2810.12210.3743510.9850.139100
3.78-3.964.2750.10311.8342110.9880.118100
3.96-4.174.260.0913.3339990.990.103100
4.17-4.434.2640.08414.5337760.990.09699.8
4.43-4.734.2570.07715.7235420.9920.08899.9
4.73-5.114.2460.07815.4933210.9930.08999.8
5.11-5.64.2480.08114.9830540.9910.09299.7
5.6-6.264.2290.08214.9127620.9910.09499.8
6.26-7.234.1940.07216.3524680.9920.08299.7
7.23-8.854.150.06119.4420800.9940.07100
8.85-12.524.0860.05621.1716220.9930.06599.7
12.52-503.7510.05520.428970.9930.06496.1

-
Processing

Software
NameVersionClassification
XDSdata reduction
XSCALEdata scaling
PHENIX1.20.1refinement
PDB_EXTRACT3.27data extraction
MoRDaphasing
PHENIXmodel building
Cootmodel building
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: pdb entry 3jru as per Morda

3jru


Resolution: 2.8→48.17 Å / SU ML: 0.3028 / Cross valid method: FREE R-VALUE / σ(F): 1.35 / Phase error: 21.1427
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflectionSelection details
Rfree0.2025 2015 2.61 %0
Rwork0.1698 75202 --
obs0.1706 77217 99.87 %-
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 48.52 Å2
Refinement stepCycle: LAST / Resolution: 2.8→48.17 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms20666 0 88 408 21162
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.004221137
X-RAY DIFFRACTIONf_angle_d0.626928788
X-RAY DIFFRACTIONf_chiral_restr0.04433333
X-RAY DIFFRACTIONf_plane_restr0.00453791
X-RAY DIFFRACTIONf_dihedral_angle_d12.48847298
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDRefine-IDTypeRms dev position (Å)
ens_1d_2AX-RAY DIFFRACTIONTorsion NCS0.290943133448
ens_1d_3AX-RAY DIFFRACTIONTorsion NCS0.346020516024
ens_1d_4AX-RAY DIFFRACTIONTorsion NCS0.298851520776
ens_1d_5AX-RAY DIFFRACTIONTorsion NCS0.308170258732
ens_1d_6AX-RAY DIFFRACTIONTorsion NCS0.311163940848
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.8-2.870.28871420.24685313X-RAY DIFFRACTION99.98
2.87-2.950.28481180.23995381X-RAY DIFFRACTION99.96
2.95-3.030.27591310.23165371X-RAY DIFFRACTION99.95
3.03-3.130.28511420.23675347X-RAY DIFFRACTION99.95
3.13-3.240.29481540.23425300X-RAY DIFFRACTION99.96
3.24-3.370.26041640.21565360X-RAY DIFFRACTION100
3.37-3.530.23221550.19745333X-RAY DIFFRACTION99.87
3.53-3.710.23951350.18615376X-RAY DIFFRACTION99.93
3.71-3.950.191270.15615372X-RAY DIFFRACTION99.98
3.95-4.250.16591360.13635399X-RAY DIFFRACTION99.95
4.25-4.680.13711720.11935346X-RAY DIFFRACTION99.87
4.68-5.350.16941230.13155426X-RAY DIFFRACTION99.82
5.35-6.740.2121340.15485419X-RAY DIFFRACTION99.78
6.74-48.170.14481820.13415459X-RAY DIFFRACTION99.26
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
13.38601977718-0.2100986508741.113214293521.75011667999-0.7980906288623.678022849680.1054523211520.093970261225-0.0853407064702-0.198949068792-0.138057873348-0.0511567202603-0.2997913858090.3265986206220.02761511601950.404730499464-0.04935647471030.121512080020.285286419719-0.01644851936860.363785619825-6.23740064991-10.8385058747-6.85717191435
20.903317433302-0.1249685819880.3437146489760.817861691163-0.3621641211952.70159194693-0.002693102491890.126599141534-0.1907352953430.01467987999710.027395034534-0.261036203110.1319030198550.237715222017-0.04748800567020.290713502799-0.02004610752710.01668786117150.224303254707-0.04473316128220.4704932629912.44726108331-25.805559429218.1051357862
30.341237519248-0.3596202723890.4183903018460.9498797201860.44825192792.30244630540.0338249365197-0.0446069034314-0.144179743159-0.02362207668390.0394204773777-0.000518004704145-0.1007997201020.172461067131-0.08293324040430.25978446506-0.1066333514630.01089868603490.2796098103190.04219209517260.4419543807482.92518567764-15.513468388832.3519178567
40.856522956529-0.1974784366330.7181810719310.92465335168-0.2349653528431.79624678401-0.0863773824936-0.09413429246070.2894368873590.0920883289425-0.11914255307-0.306263392144-0.3666334722070.4131559795180.2464204150580.472136347076-0.150851032905-0.04071108757460.38920487094-0.0009879789184730.4710460603275.4092232286720.512690280257.214214389
51.2877142651-0.01563144654360.7897351232590.6773855401090.709381078751.33531998325-0.0342837922199-0.1552509184030.104790306262-0.0521230367161-0.057414315523-0.0239060212658-0.238052287243-0.06643009278070.0793270810040.403128018254-0.0834828840930.03484010197230.213850412540.03085712755930.325047335258-13.58151805315.156332025132.1421538711
60.43760734740.592952250392-0.2428281078430.930879674439-0.3900499436340.173873942540.0840945531558-0.545166238259-0.01571470688970.267244562091-0.09067190075050.2867401032650.316851722058-0.653120007426-0.07662980750730.624959247501-0.3342707798420.1784389808161.449000077240.08110540453040.579862992518-63.7654128493-19.698403090872.7399364615
71.507807235290.4954224425040.06303307928711.2111505617-0.5045458506050.853551698664-0.0287307261375-0.389665893540.1116595095550.152861527701-0.03486922376720.19434089644-0.1231441619-0.5292386884030.05327659483570.35985322162-0.0007686167850910.04964147357160.649605544782-0.09834611492350.314809923203-40.2450452174.3876078504965.929337636
81.060774968560.8645455283670.2164834876372.033681152260.3463561181750.7958673075580.216090189915-0.3866211250380.03128535002750.559710404727-0.201686504307-0.259830351164-0.08254034051240.0830764923521-0.02207133515490.513832727561-0.12755173475-0.1005570320910.5220819352120.05185368875910.3583158408413.18217739413-6.2137746643179.8837516025
91.359378467650.4363955394620.3189106032240.9797068213450.4529445737341.128772217270.221844723426-0.364753549619-0.2397844275440.156571090342-0.0548556904075-0.02331158097950.271779511261-0.232352985395-0.1669668547270.452115920617-0.173300851917-0.07062613848990.4829940051720.1542343100910.361384196587-18.8325095917-27.038010099569.6594055244
100.152996152978-0.2101531858990.07038986396330.3606398528590.1617245106270.8446345991440.116395607637-0.321261490443-0.1984012974050.203064988175-0.08530652135210.3791418619330.250729805886-0.81967909418-0.2297656263030.531181432697-0.596057755061-0.03943236461661.099779214090.2951785789550.693881858629-62.998253781-43.274864881950.614612164
111.308440401950.4582377675330.06909651892410.737767440309-0.1239047842330.8234899232610.246742062197-0.173540577258-0.1461506352940.117257601273-0.0627437152231-0.0993503872080.279828892729-0.158370909063-0.1362362419410.444803351318-0.146858701802-0.1141343728370.2869802611260.1217743724260.429722061256-34.5473565834-40.307823416631.3891857396
124.604255954050.413257001167-0.5258743512650.2076336029140.5981329021513.034165825530.173586554020.144753491573-0.172686226716-0.142990215562-0.07731628487280.05468057052160.02141094507360.0379072245443-0.09352507800150.4897949030280.0586256638898-0.05361974926420.19550386147-0.00259857365170.392990198868-31.7366346593-15.6058468-9.74646355696
131.10849150749-0.1153888272550.9858924668871.142772495031.688217668853.702223330640.05831394365170.110649202953-0.173769142212-0.3289337686010.0262108716330.045992583736-0.2191219707540.0855932213594-0.09217517519820.3957202681190.0151606370686-0.05191692573510.1683470808480.01896538004630.367878409315-40.5418819834-5.65553594450.339359419771
140.3806992007560.7422231370410.01325128822771.764502828230.2162670225262.476228250120.00375280592088-0.1907742199870.2530706244420.00836151892943-0.09182498532320.274818704195-0.425478628222-0.3749815219750.1263090498920.3510457041310.08918019904980.001560386220550.3294256031360.006921630898580.408498938523-53.87616929435.0766324096121.8415000966
150.336912278719-0.326916254397-0.02184514783020.8545593835750.1794296941122.64864054806-0.00874985221974-0.2202186251470.0235727012670.0215725479393-0.02281629158880.05532782133840.045904637683-0.2341415153670.0181076083880.239425973667-0.06649645037630.004402429413530.3354003011670.03656136458140.361948244886-50.050255168-9.5149468968425.7915888936
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 1 through 98 )AA1 - 981 - 98
22chain 'A' and (resid 99 through 227 )AA99 - 22799 - 227
33chain 'A' and (resid 228 through 468 )AA228 - 468228 - 468
44chain 'B' and (resid 1 through 189 )BF1 - 1891 - 189
55chain 'B' and (resid 190 through 468 )BF190 - 468190 - 468
66chain 'C' and (resid 2 through 167 )CK2 - 1671 - 166
77chain 'C' and (resid 168 through 468 )CK168 - 468167 - 467
88chain 'D' and (resid 0 through 189 )DO0 - 1891 - 190
99chain 'D' and (resid 190 through 468 )DO190 - 468191 - 469
1010chain 'E' and (resid 1 through 167 )ES1 - 1671 - 167
1111chain 'E' and (resid 168 through 468 )ES168 - 468168 - 468
1212chain 'F' and (resid 0 through 98 )FX0 - 981 - 99
1313chain 'F' and (resid 99 through 167 )FX99 - 167100 - 168
1414chain 'F' and (resid 168 through 247 )FX168 - 247169 - 248
1515chain 'F' and (resid 248 through 468 )FX248 - 468249 - 469

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more