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Yorodumi- PDB-8bgo: N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 8bgo | ||||||
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Title | N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus with substrate N,N-diacetylchitobiose | ||||||
Components | Diacetylchitobiose deacetylase | ||||||
Keywords | HYDROLASE / hyperthermophile | ||||||
Function / homology | N-acetylglucosaminylphosphatidylinositol deacetylase activity / N-acetylglucosaminyl phosphatidylinositol deacetylase-related / Putative deacetylase LmbE-like domain superfamily / GlcNAc-PI de-N-acetylase / GPI anchor biosynthetic process / metal ion binding / Diacetylchitobiose deacetylase Function and homology information | ||||||
Biological species | Thermococcus chitonophagus (archaea) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.08 Å | ||||||
Authors | Rypniewski, W. / Bejger, M. / Biniek-Antosiak, K. | ||||||
Funding support | Poland, 1items
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Citation | Journal: Int J Mol Sci / Year: 2022 Title: Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus. Authors: Biniek-Antosiak, K. / Bejger, M. / Sliwiak, J. / Baranowski, D. / Mohammed, A.S.A. / Svergun, D.I. / Rypniewski, W. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 8bgo.cif.gz | 652.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb8bgo.ent.gz | 541.5 KB | Display | PDB format |
PDBx/mmJSON format | 8bgo.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 8bgo_validation.pdf.gz | 3.3 MB | Display | wwPDB validaton report |
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Full document | 8bgo_full_validation.pdf.gz | 3.3 MB | Display | |
Data in XML | 8bgo_validation.xml.gz | 107.9 KB | Display | |
Data in CIF | 8bgo_validation.cif.gz | 144.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/bg/8bgo ftp://data.pdbj.org/pub/pdb/validation_reports/bg/8bgo | HTTPS FTP |
-Related structure data
Related structure data | 8bgnSC 8bgpC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
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