- PDB-7wdn: Crystal structures of MeBglD2 in complex with various saccharides -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 7wdn
Title
Crystal structures of MeBglD2 in complex with various saccharides
Components
beta-glucosidase
Keywords
HYDROLASE / glycoside hydrolase family 1
Function / homology
Function and homology information
scopolin beta-glucosidase activity / beta-glucosidase / beta-glucosidase activity / cellulose catabolic process / cytosol Similarity search - Function
Glycoside hydrolase, family 1, beta-glucosidase / Glycoside hydrolase family 1, active site / Glycosyl hydrolases family 1 active site. / Glycosyl hydrolases family 1, N-terminal conserved site / Glycosyl hydrolases family 1 N-terminal signature. / Glycosyl hydrolase family 1 / Glycoside hydrolase family 1 / Glycoside hydrolase superfamily Similarity search - Domain/homology
Resolution: 1.8→30 Å / Cor.coef. Fo:Fc: 0.971 / Cor.coef. Fo:Fc free: 0.951 / SU B: 6.004 / SU ML: 0.076 / Cross valid method: THROUGHOUT / ESU R: 0.11 / ESU R Free: 0.096 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.21005
3241
5 %
RANDOM
Rwork
0.15934
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obs
0.16186
61901
99.95 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK