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Yorodumi- PDB-7va1: Crystal structure of human 3-phosphoglycerate dehydrogenase in co... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7va1 | ||||||
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Title | Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35 | ||||||
Components | D-3-phosphoglycerate dehydrogenase | ||||||
Keywords | OXIDOREDUCTASE | ||||||
Function / homology | Function and homology information gamma-aminobutyric acid metabolic process / threonine metabolic process / 2-oxoglutarate reductase / glial cell development / phosphoglycerate dehydrogenase / phosphoglycerate dehydrogenase activity / taurine metabolic process / Serine biosynthesis / glycine metabolic process / malate dehydrogenase ...gamma-aminobutyric acid metabolic process / threonine metabolic process / 2-oxoglutarate reductase / glial cell development / phosphoglycerate dehydrogenase / phosphoglycerate dehydrogenase activity / taurine metabolic process / Serine biosynthesis / glycine metabolic process / malate dehydrogenase / L-serine biosynthetic process / L-malate dehydrogenase activity / G1 to G0 transition / neural tube development / spinal cord development / glutamine metabolic process / brain development / neuron projection development / NAD binding / regulation of gene expression / electron transfer activity / extracellular exosome / cytosol Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.74 Å | ||||||
Authors | Cen, Y. / Gao, D. / Zhou, J. / Tian, P. | ||||||
Funding support | China, 1items
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Citation | Journal: To Be Published Title: Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35 Authors: Cen, Y. / Gao, D. / Zhou, J. / Tian, P. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7va1.cif.gz | 377.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7va1.ent.gz | 255.6 KB | Display | PDB format |
PDBx/mmJSON format | 7va1.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/va/7va1 ftp://data.pdbj.org/pub/pdb/validation_reports/va/7va1 | HTTPS FTP |
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-Related structure data
Related structure data | 2g76S S: Starting model for refinement |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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