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Open data
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Basic information
Entry | Database: PDB / ID: 7od2 | ||||||
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Title | NMR structure of the Anemonia erythraea AeTX-K toxin | ||||||
![]() | Kappa-actitoxin-Aer3a | ||||||
![]() | TOXIN / Sea anemone Kv channel blockers | ||||||
Function / homology | ShKT domain / ShKT domain profile. / nematocyst / potassium channel regulator activity / toxin activity / extracellular region / Kappa-actitoxin-Aer3a![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / DGSA-distance geometry simulated annealing | ||||||
![]() | Qasim, A. / Qassem, N. / Chill, J.H. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Structural determination of AeTX-K by NMR Authors: Qasim, A. / Shaked, H. / Chill, J.H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 239.9 KB | Display | ![]() |
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PDB format | ![]() | 209.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 388.9 KB | Display | ![]() |
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Full document | ![]() | 495.8 KB | Display | |
Data in XML | ![]() | 12.9 KB | Display | |
Data in CIF | ![]() | 21.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | Similarity search - Function & homology ![]() |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 3998.740 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 46 mM / Label: condition_1 / pH: 5.7 / Pressure: 1 atm / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker DRX700 / Manufacturer: Bruker / Model: DRX700 / Field strength: 700 MHz |
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Processing
NMR software |
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Refinement | Method: DGSA-distance geometry simulated annealing / Software ordinal: 5 | ||||||||||||||||||||||||
NMR representative | Selection criteria: closest to the average | ||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 82 / Conformers submitted total number: 23 |