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Yorodumi- PDB-6sv1: Crystal structure of Rhodospirillum rubrum Rru_A0973 E34A variant -
+Open data
-Basic information
Entry | Database: PDB / ID: 6sv1 | ||||||
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Title | Crystal structure of Rhodospirillum rubrum Rru_A0973 E34A variant | ||||||
Components | Encapsulated Ferritin | ||||||
Keywords | OXIDOREDUCTASE / Encapsulated ferritin / ferroxidase / ferritin | ||||||
Function / homology | Function and homology information encapsulin nanocompartment / ferroxidase / ferroxidase activity / iron ion transport / intracellular iron ion homeostasis / metal ion binding Similarity search - Function | ||||||
Biological species | Rhodospirillum rubrum (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.19 Å | ||||||
Authors | Marles-Wright, J. / He, D. | ||||||
Funding support | United Kingdom, 1items
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Citation | Journal: J.Biol.Chem. / Year: 2020 Title: Dissecting the structural and functional roles of a putative metal entry site in encapsulated ferritins. Authors: Piergentili, C. / Ross, J. / He, D. / Gallagher, K.J. / Stanley, W.A. / Adam, L. / Mackay, C.L. / Basle, A. / Waldron, K.J. / Clarke, D.J. / Marles-Wright, J. #1: Journal: Acta Crystallogr., Sect. D: Biol. Crystallogr. / Year: 2012 Title: Towards automated crystallographic structure refinement with phenix.refine. Authors: Marles-Wright, J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6sv1.cif.gz | 1.2 MB | Display | PDBx/mmCIF format |
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PDB format | pdb6sv1.ent.gz | 852.3 KB | Display | PDB format |
PDBx/mmJSON format | 6sv1.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6sv1_validation.pdf.gz | 24.2 MB | Display | wwPDB validaton report |
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Full document | 6sv1_full_validation.pdf.gz | 24.2 MB | Display | |
Data in XML | 6sv1_validation.xml.gz | 81.4 KB | Display | |
Data in CIF | 6sv1_validation.cif.gz | 125.2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/sv/6sv1 ftp://data.pdbj.org/pub/pdb/validation_reports/sv/6sv1 | HTTPS FTP |
-Related structure data
Related structure data | 6suwC 5da5S S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1 / Beg auth comp-ID: THR / Beg label comp-ID: THR / End auth comp-ID: THR / End label comp-ID: THR / Auth seq-ID: 8 - 90 / Label seq-ID: 8 - 90
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