- PDB-6jgu: Crystal structure at atomic resolution reveals the catalytic mech... -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 6jgu
Title
Crystal structure at atomic resolution reveals the catalytic mechanism in peptidyl-tRNA hydrolase from Acinetobacter baumannii.
Components
Peptidyl-tRNA hydrolase
Keywords
HYDROLASE
Function / homology
Function and homology information
peptidyl-tRNA hydrolase / peptidyl-tRNA hydrolase activity / protein quality control for misfolded or incompletely synthesized proteins / rescue of stalled ribosome / tRNA binding / cytoplasm Similarity search - Function
Resolution: 1.02→49.91 Å / Cor.coef. Fo:Fc: 0.982 / Cor.coef. Fo:Fc free: 0.978 / SU B: 0.953 / SU ML: 0.02 / Cross valid method: THROUGHOUT / ESU R: 0.026 / ESU R Free: 0.026 / Details: HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.15726
3778
4.9 %
RANDOM
Rwork
0.13671
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obs
0.13772
73420
88.37 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å